262580 AdoMet_dc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262580 chr_5 AdoMet_dc 1565519 1567399 - AdoMet_dc

Synonyms

NCBI ID Ensembl Genomes exon ID
7448161 Thaps262580.1, Thaps262580.3, Thaps262580.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0292

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0033
 0.48

Most Highly Correlated Transcripts

bd1092

(bd1092) NA
0.8984

268582

(DHC2) recQ_fam
0.8671

262616

(MYB22)
0.8634

bd1094

(bd1094) FH2 superfamily
0.861

262487

HepA
0.8601

33033

YSH1
0.8584

17468

CK_II_beta
0.8533

18104

MutY
0.8433

263997

(APA1) Adaptin_N
0.8392

1778

hypothetical protein
0.8343

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AdoMet_dc S-adenosylmethionine decarboxylase; This family contains several S-adenosylmethionine decarboxylase... cl00687 94.106 6.78E-23 254 - 331 specific 251466
AdoMet_dc superfamily S-adenosylmethionine decarboxylase; This family contains several S-adenosylmethionine decarboxylase... - 94.106 6.78E-23 254 - 331 superfamily 260572

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008757 GO:0003824 -

GO:0008757

S-adenosylmethionine-dependent methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
GO Category: 
MF

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

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