31737 fabG
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31737 chr_2 fabG 951043 953004 - fabG

Synonyms

NCBI ID Ensembl Genomes exon ID
7450258 Thaps31737.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0177

Most Highly Correlated Transcripts

bd789

(bd789) ABC_ATPase superfamily
0.9304

261357

NAD_binding_8 superfamily
0.8945

262611

RabGAP-TBC
0.8705

17468

CK_II_beta
0.8674

34442

CAP_ED
0.8651

8003

PIG-L
0.8639

33092

RINGv superfamily
0.8625

bd1777

(bd1777) NA
0.8603

15972

RRM2_SF3B4
0.8597

30149

Solute_trans_a
0.8561

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 230.127 2.21E-70 398 - 649 superfamily 263925
FAA_hydrolase Fumarylacetoacetate (FAA) hydrolase family; This family consists of fumarylacetoacetate (FAA)... cl11421 210.245 2.40E-63 114 - 349 specific 250705
FAA_hydrolase superfamily Fumarylacetoacetate (FAA) hydrolase family; This family consists of fumarylacetoacetate (FAA)... - 210.245 2.40E-63 114 - 349 superfamily 264359
fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated - 238.906 1.43E-73 392 - 641 multi-dom 235546
HpaG-C-term 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit; This... - 134.939 7.47E-36 72 - 350 multi-dom 131356

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 152186 Not available 251873 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0008152 GO:0000247 GO:0008416 GO:0016863 GO:0018842 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0000247

C-8 sterol isomerase activity

Details: 
Catalysis of the reaction which results in unsaturation at C-7 in the B ring of sterols.
GO Category: 
MF

GO:0008416

delta5-delta2,4-dienoyl-CoA isomerase activity

Details: 
Catalysis of the isomerization of 3,5-dienoyl-CoA to 2,4-dienoyl-CoA.
GO Category: 
MF

GO:0016863

intramolecular oxidoreductase activity, transposing C=C bonds

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more carbon-carbon double bonds in the molecule are rearranged, and no oxidized product appears.
GO Category: 
MF

GO:0018842

3-carboxymuconate cycloisomerase type II activity

Details: 
Catalysis of the reaction: 3-sulfomuconate = 4-sulfolactone.
GO Category: 
MF

Add comment

Log in to post comments