22961 NPD_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22961 chr_6 NPD_like 182908 184024 - NPD_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7442334 Thaps22961.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0451

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0087
 0.32

Most Highly Correlated Transcripts

bd1813

(bd1813) NA
0.8921

bd690

(bd690) NA
0.8797

19158

GRX_PICOT_like
0.8779

bd1934

(bd1934) NA
0.8654

37377

AOX
0.8635

803

Synaptobrevin
0.8634

267979

HCO3_cotransp superfamily
0.8612

13308

PLN02948
0.8546

16114

PLN02350
0.8536

bd877

(bd877) NA
0.8507

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes... cl17186 179.216 18 - 268 specific 240081
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 179.216 18 - 268 superfamily 266538
NMO Nitronate monooxygenase; Nitronate monooxygenase (NMO), formerly referred to as 2-nitropropane... - 153.331 10 - 358 multi-dom 251701

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38755 PHATRDRAFT_38755 Not available 258170 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Nitrogen metabolism map00910

GO Terms

GO:0006118 GO:0016491 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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