24118 (Tp_Myb1R_SHAQKYF1) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24118 chr_10 (Tp_Myb1R_SHAQKYF1) regulator [Rayko] 191201 194597 - regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7451045 Thaps24118.2, Thaps24118.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0409

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0007
 0.40

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9335

bd446

(bd446) HrpA
0.8948

bd392

(bd392) DEXDc
0.882

263997

(APA1) Adaptin_N
0.8604

bd1777

(bd1777) NA
0.8567

263994

Adaptin_N
0.8419

5630

Vps51
0.8358

23544

hypothetical protein
0.8336

263610

COG3899
0.8316

25653

hypothetical protein
0.8298

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49525 PHATRDRAFT_49525 165241 283242 Not available Not available Not available 500657

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 GO:0004339 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0004339

glucan 1,4-alpha-glucosidase activity

Details: 
Catalysis of the hydrolysis of terminal (1->4)-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose.
GO Category: 
MF

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