24413 LCAT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24413 chr_12 LCAT 79363 83237 - LCAT

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0297

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0133
 0.40

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9286

bd392

(bd392) DEXDc
0.9114

263997

(APA1) Adaptin_N
0.9082

bd1893

(bd1893) NA
0.8981

bd718

(bd718) PRK10387
0.8965

bd446

(bd446) HrpA
0.8947

bd624

(bd624) Glyco_transf_34 superfamily
0.8927

bd1387

(bd1387) psbE
0.8841

bd668

(bd668) NA
0.8826

bd1078

(bd1078) NA
0.8818

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LCAT Lecithin:cholesterol acyltransferase; Lecithin:cholesterol acyltransferase (LCAT) is involved in... - 84.8775 1.24E-17 422 - 941 multi-dom 251302

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49702 PHATRDRAFT_49702 190547 258595 Not available Not available AT1G04010.1 536272

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004607 GO:0006629 -

GO:0004607

phosphatidylcholine-sterol O-acyltransferase activity

Details: 
Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine.
GO Category: 
MF

GO:0006629

lipid metabolic process

Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO Category: 
BP

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