25575 HTTM superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25575	chr_20	HTTM superfamily	64797	66836	-	HTTM superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448482	Thaps25575.3, Thaps25575.2, Thaps25575.1, Thaps25575.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0189

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0008	0.44	0.00078 37000

Most Highly Correlated Transcripts

12899 AAA 0.8725	268443 SAICAR_synt_Sc 0.8661	21220 KU superfamily 0.8557	261040 RsuA 0.8513	263722 FIG superfamily 0.8486	1135 hypothetical protein 0.8457
264065 (cobA) PLN02625 0.8405	267979 HCO3_cotransp superfamily 0.8391	264556 FBPase 0.839	263721 LMF1 0.838

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HTTM superfamily		Horizontally Transferred TransMembrane Domain; Sequence analysis of vitamin K dependent gamma-...	-	77.3672	4.33E-16	23 - 188	superfamily	261439

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_42864	PHATRDRAFT_42864	252187	318929	230137	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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