261825 Tryp_SPc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261825 chr_3 Tryp_SPc 1169235 1170768 + Tryp_SPc

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0452

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0012
 0.49

Most Highly Correlated Transcripts

bd877

(bd877) NA
0.8153

bd690

(bd690) NA
0.771

263610

COG3899
0.7666

bd1667

(bd1667) Mpp10
0.756

bd895

(bd895) NA
0.7557

bd1934

(bd1934) NA
0.7526

23334

hypothetical protein
0.744

263599

COG3899
0.7384

bd409

(bd409) Snf7 superfamily
0.7355

bd1806

(bd1806) AAT_I superfamily
0.7344

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Tryp_SPc superfamily Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are... - 219.84 7.55E-69 2 - 222 superfamily 238113
Tryp_SPc superfamily Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are... - 219.84 7.55E-69 2 - 222 superfamily 238113
Tryp_SPc Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens that are... - 225.25 4.73E-71 1 - 222 multi-dom 214473

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004295 GO:0006508 GO:0004263 -

GO:0004295

NA

Details: 
NA
GO Category: 
NA

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004263

NA

Details: 
NA
GO Category: 
NA

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