263984 SprT-like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263984 chr_13 SprT-like 247249 248726 + SprT-like

Synonyms

NCBI ID Ensembl Genomes exon ID
7445717 Thaps263984.1, Thaps263984.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0263

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0014
 0.46

Most Highly Correlated Transcripts

bd529

(bd529) SNF2_N
0.9212

bd1037

(bd1037) Ycf66_N
0.9162

bd1339

(bd1339) psaD
0.9041

bd668

(bd668) NA
0.8986

bd2028

(bd2028) NA
0.8981

bd843

(bd843) NA
0.8908

bd211

(bd211) Maf_Ham1 superfamily
0.8866

bd1863

(bd1863) NA
0.8861

bd1342

(bd1342) psaL
0.8842

bd1403

(bd1403) NA
0.883

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SprT-like SprT-like family; This family represents a domain found in eukaryotes and prokaryotes. The domain... cl19237 124.035 1.22E-33 219 - 374 specific 255861
SprT-like superfamily SprT-like family; This family represents a domain found in eukaryotes and prokaryotes. The domain... - 124.035 1.22E-33 219 - 374 superfamily 267590

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13028 PHATRDRAFT_13028 162340 158448 117867 Cre01.g003700.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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