26759 NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26759 chr_1 NADB_Rossmann superfamily 2113506 2115396 - NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps26759.2, Thaps26759.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0010

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0077
 0.37

Most Highly Correlated Transcripts

26759

NADB_Rossmann superfamily
1

ThpsCp022

(psaE) photosystem I subunit IV
0.9124

ThpsCt004

(trnR(ucu))
0.8849

ThpsCp055

(ycf12) Ycf12
0.8773

ThpsCp056

(psbZ) photosystem II protein Z
0.8621

ThpsCp076

(psbY) photosystem II protein Y
0.8525

ThpsCp136

(rpl27) ribosomal protein L27
0.8428

11272

(Lhcr8) fucoxanthin chl a/c light-harvesting protein
0.842

bd1039

(bd1039) psbV
0.838

ThpsCp005

(psbV) photosystem II cytochrome c550
0.838

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 376.354 1.86E-126 56 - 388 superfamily 263925

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13001 PHATRDRAFT_13001 188173 233711 113747 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0016630 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0016630

protochlorophyllide reductase activity

Details: 
Catalysis of the reaction: chlorophyllide a + NADP+ = protochlorophyllide + NADPH + H+.
GO Category: 
MF

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