268335 ELFV_dehydrog
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268335 chr_2 ELFV_dehydrog 1843215 1845210 + ELFV_dehydrog

Synonyms

NCBI ID Ensembl Genomes exon ID
7452464 Thaps268335.1, Thaps268335.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0406

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0243
 0.36

Most Highly Correlated Transcripts

1197

RhaT
0.8583

269513

PTZ00461
0.8575

269328

(PCB1) COG4799
0.8454

1275

hypothetical protein
0.8411

13459

HslU
0.8356

11307

ABC_ATPase superfamily
0.8299

263012

Ras_like_GTPase superfamily
0.8289

24796

hypothetical protein
0.8288

1900

hypothetical protein
0.8277

21405

hypothetical protein
0.8273

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glutamate, leucine, phenylalanine and valine... cl19202 76.868 6.48E-17 318 - 423 specific 214847
Bac_GDH superfamily Bacterial NAD-glutamate dehydrogenase; This family consists of several bacterial proteins which are... - 76.868 6.48E-17 318 - 423 superfamily 267555
NAD_bind_amino_acid_DH superfamily NAD(P) binding domain of amino acid dehydrogenase-like proteins; Amino acid dehydrogenase(DH)-like... - 71.7983 2.36E-14 188 - 441 superfamily 266569

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45239 PHATRDRAFT_45239 209960 65004 433762 Not available Not available 541826

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0006520 GO:0016491 -

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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