2946 UMP_CMP_kin_fam
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2946 chr_2 UMP_CMP_kin_fam 2300155 2301020 + UMP_CMP_kin_fam

Synonyms

NCBI ID Ensembl Genomes exon ID
7450451 Thaps2946.1, Thaps2946.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0209

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0173
 0.35

Most Highly Correlated Transcripts

2988

hypothetical protein
0.8993

269320

(DGD2) UGD_SDR_e
0.887

6383

PTZ00162
0.8856

8065

hypothetical protein
0.8854

39299

(ARF3) Arf1_5_like
0.8836

262513

(RPA2_2) RFA2
0.8827

7249

(ARF5) Ras_like_GTPase superfamily
0.8816

268840

CBS_pair_10
0.8808

31829

CBS_like
0.8792

16295

FBPase
0.8779

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ADK Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (... cl17190 195.533 4.01E-62 56 - 234 specific 238713
NK superfamily Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of... - 195.533 4.01E-62 56 - 234 superfamily 266541
UMP_CMP_kin_fam UMP-CMP kinase family; This subfamily of the adenylate kinase superfamily contains examples of UMP-... - 263.066 9.19E-89 56 - 243 multi-dom 130426

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd1367 PHATRDRAFT_bd1367 274749 194838 429140 Cre01.g029750.t1.1 AT5G26667.3 251122

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0005524 GO:0006139 GO:0019201 GO:0016776 GO:0004127 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006139

nucleobase-containing compound metabolic process

Details: 
Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO Category: 
BP

GO:0019201

nucleotide kinase activity

Details: 
Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate.
GO Category: 
MF

GO:0016776

phosphotransferase activity, phosphate group as acceptor

Details: 
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor).
GO Category: 
MF

GO:0004127

cytidylate kinase activity

Details: 
Catalysis of the reaction: ATP + (d)CMP = ADP + (d)CDP.
GO Category: 
MF

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