270013 DNA_pol_A_plastid_like
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
270013 chr_20 DNA_pol_A_plastid_like 82022 85632 + DNA_pol_A_plastid_like
NCBI ID Ensembl Genomes exon ID
7448484 Thaps270013.1, Thaps270013.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0238
Normalized Mean Residue
Thaps_bicluster_0042
0.43
HCO3_cotransp superfamily
0.9069
SAICAR_synt_Sc
0.9005
PLN02948
0.8954
hypothetical protein
0.8909
hypothetical protein
0.8908
TIM_phosphate_binding superfamily
0.8863
TRX_reduct
0.8855
hypothetical protein
0.8825
hypothetical protein
0.8815
FusA
0.8765
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DNA_pol_A_plastid_like DNA polymerase A type from plastids of higher plants possibly involve in DNA replication or in the... cl02626 633.665 0 645 - 1019 specific 176477
DNA_pol_A superfamily Family A polymerase primarily fills DNA gaps that arise during DNA repair, recombination and... - 633.665 0 645 - 1019 superfamily 261379
DNA_polA_I_Ecoli_like_exo DEDDy 3'-5' exonuclease domain of Escherichia coli DNA polymerase I and similar... cl10012 138.037 1.28E-36 306 - 525 specific 176651
DnaQ_like_exo superfamily DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like... - 138.037 1.28E-36 306 - 525 superfamily 263941
PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication,... - 296.482 3.46E-88 283 - 1021 multi-dom 223820
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51407 PHATRDRAFT_51407 199589 249814 208668 Cre08.g363837.t1.1 AT1G50840.1 284102
KEGG description KEGG Pathway
Homologous recombination map03440
GO:0003677 GO:0003887 GO:0006260 GO:0003676 GO:0005622 GO:0008408 GO:0003889 GO:0003890 GO:0003891 GO:0003893 GO:0003894 GO:0003895 GO:0015999 GO:0016000 GO:0016448 GO:0016449 GO:0016450 GO:0016451 GO:0016452 GO:0019984 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

DNA-directed DNA polymerase activity

Details: 
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer.
GO Category: 
MF

DNA replication

Details: 
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
GO Category: 
BP

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

3'-5' exonuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end.
GO Category: 
MF

NA

Details: 
NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

Details: 
NA
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NA

NA

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NA
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NA

NA

Details: 
NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

Details: 
NA
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NA

NA

Details: 
NA
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NA

NA

Details: 
NA
GO Category: 
NA
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