32092 SPX
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32092 chr_2 SPX 423962 426068 - SPX

Synonyms

NCBI ID Ensembl Genomes exon ID
7442243 Thaps32092.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0289

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0015
 0.38

Most Highly Correlated Transcripts

bd1857

(bd1857) DnaJ
0.8472

9636

hypothetical protein
0.8231

12899

AAA
0.8224

bd974

(bd974) DUF751
0.8221

5920

NA
0.8186

23762

CAF1 superfamily
0.8176

261040

RsuA
0.8125

270199

(Tpt1) triose phosphate/phosphate translocator
0.8085

1668

DnaJ
0.8012

29183

PRK12344
0.801

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 80.4357 1.51E-16 269 - 691 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 80.4357 1.51E-16 269 - 691 superfamily 119392
SPX superfamily SPX domain; We have named this region the SPX domain after (SYG1, Pho81 and XPR1). This 180 residue... - 96.7309 6.21E-23 1 - 155 superfamily 251734
SPX superfamily SPX domain; We have named this region the SPX domain after (SYG1, Pho81 and XPR1). This 180 residue... - 96.7309 6.21E-23 1 - 155 superfamily 251734
MFS_1 Major Facilitator Superfamily; Major Facilitator Superfamily. - 89.7864 1.11E-19 269 - 653 multi-dom 254360

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_19586 PHATRDRAFT_19586 246797 240912 Not available Not available AT4G11810.1 564500

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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