33067 (Tp_CBF/NF4) CBFD_NFYB_HMF
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33067 chr_3 (Tp_CBF/NF4) CBFD_NFYB_HMF 940097 940895 - CBFD_NFYB_HMF

Synonyms

NCBI ID Ensembl Genomes exon ID
7451648 Thaps33067.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0398

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0020
 0.47

Most Highly Correlated Transcripts

6630

hypothetical protein
0.8972

1856

hypothetical protein
0.8905

39741

(APM3) AP-3_Mu3_Cterm
0.8889

15351

PKc_like superfamily
0.8787

267979

HCO3_cotransp superfamily
0.8717

260922

Leu_Phe_trans superfamily
0.8708

950

hypothetical protein
0.8696

2022

HA
0.8691

268443

SAICAR_synt_Sc
0.8688

4864

hypothetical protein
0.8684

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CBFD_NFYB_HMF Histone-like transcription factor (CBF/NF-Y) and archaeal histone; This family includes... cl00074 80.3475 1.06E-19 187 - 250 specific 250147
H4 superfamily Histone H4, one of the four histones, along with H2A, H2B and H3, which forms the eukaryotic... - 80.3475 1.06E-19 187 - 250 superfamily 260174

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd310 PHATRDRAFT_bd310 210140 316133 Not available Cre12.g556400.t1.1 AT1G56170.2 353347

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

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