37040 anaphase promoting complex subunit
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37040 chr_13 anaphase promoting complex subunit 641896 642289 - anaphase promoting complex subunit

Synonyms

NCBI ID Ensembl Genomes exon ID
7446955 Thaps37040.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0248

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.9074

37100

Zn-ribbon_RPC11
0.891

34702

Sybindin superfamily
0.8882

36419

RabGAP-TBC
0.882

34100

GlcNAc superfamily
0.8804

3890

COG0398
0.8757

24619

2-Hacid_dh_1
0.8757

337

TEF1
0.8751

5101

UbiE
0.8751

33203

AAT_I superfamily
0.8748

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10271 PHATRDRAFT_10271 145251 102657 68103 Cre13.g590900.t1.2 AT3G05870.2 345071

KEGG

KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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