406 (GOX) FMN_dh
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
406 chr_4 (GOX) FMN_dh 1526809 1528121 + FMN_dh

Synonyms

NCBI ID Ensembl Genomes exon ID
7448850 Thaps406.1, Thaps406.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0366

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0020
 0.47

Most Highly Correlated Transcripts

37497

cysE
0.9069

268443

SAICAR_synt_Sc
0.8972

40200

TRX_reduct
0.8896

30701

PRK05279
0.8725

41655

Chloroa_b-bind
0.8648

268143

Nudix_Hydrolase
0.8639

4108

hypothetical protein
0.8626

36007

Aldolase_II superfamily
0.8571

269333

PTR2 superfamily
0.8566

10929

NYD-SP28
0.8528

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
alpha_hydroxyacid_oxid_FMN Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes. This family occurs in both... cl17186 391.425 9.54E-135 26 - 393 specific 239203
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 391.425 9.54E-135 26 - 393 superfamily 266538
FMN_dh FMN-dependent dehydrogenase; FMN-dependent dehydrogenase. - 423.872 9.16E-147 32 - 398 multi-dom 250340

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22568 PHATRDRAFT_22568 181873 259728 Not available Cre03.g171300.t1.2 AT4G18360.1 348294

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

GO:0006118 GO:0016491 GO:0003973 GO:0008891 GO:0009339 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0003973

(S)-2-hydroxy-acid oxidase activity

Details: 
Catalysis of the reaction: (S)-2-hydroxy-acid + O2 = 2-oxo acid + hydrogen peroxide.
GO Category: 
MF

GO:0008891

glycolate oxidase activity

Details: 
Catalysis of the reaction: glycolate + O2 = glyoxylate + hydrogen peroxide.
GO Category: 
MF

GO:0009339

glycolate oxidase complex

Details: 
An enzyme complex that catalyzes the oxidation of 2-hydroxy acid to form 2-oxo acid and hydrogen peroxide (H2O2). The enzyme is a flavoprotein (FMN).
GO Category: 
CC

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