6459 Spc97_Spc98
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6459 chr_6 Spc97_Spc98 1626887 1630635 + Spc97_Spc98

Synonyms

NCBI ID Ensembl Genomes exon ID
7444567 Thaps6459.1, Thaps6459.3, Thaps6459.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0263

Most Highly Correlated Transcripts

12836

EEP superfamily
0.9236

21791

hypothetical protein
0.9109

6922

hypothetical protein
0.9066

22928

hypothetical protein
0.9023

10934

Adenylation_DNA_ligase_like superfamily
0.8996

5760

SART-1
0.8966

268825

COG5647
0.8959

21190

SAC3_GANP
0.8948

5869

hypothetical protein
0.8933

24891

zf-CW
0.8931

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Spc97_Spc98 superfamily Spc97 / Spc98 family; The spindle pole body (SPB) functions as the microtubule-organizing centre in... - 326 6.79E-99 410 - 1002 superfamily 252397
Spc97_Spc98 superfamily Spc97 / Spc98 family; The spindle pole body (SPB) functions as the microtubule-organizing centre in... - 326 6.79E-99 410 - 1002 superfamily 252397

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44333 PHATRDRAFT_44333 224880 317641 460965 Cre11.g467745.t1.1 AT5G06680.1 487955

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000226 GO:0000922 GO:0005815 -

GO:0000226

microtubule cytoskeleton organization

Details: 
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
GO Category: 
BP

GO:0000922

spindle pole

Details: 
Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.
GO Category: 
CC

GO:0005815

microtubule organizing center

Details: 
An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
GO Category: 
CC

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