8866 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8866 chr_11a hypothetical protein 727164 728112 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7444499 Thaps8866.1, Thaps8866.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0185

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0028
 0.44

Most Highly Correlated Transcripts

11664

DUF3510
0.8214

21620

AAT_I superfamily
0.8201

9262

hypothetical protein
0.8143

8885

DUF3510
0.8132

9650

hypothetical protein
0.8073

6592

TroA-like superfamily
0.8069

263848

Voltage_gated_ClC superfamily
0.7899

261279

(DGT) PLN03242
0.7891

262632

Glyco_tranf_GTA_type superfamily
0.7847

264481

Gly_transf_sug
0.7843

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 271996 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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