20629 YCII superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20629 chr_1 YCII superfamily 470071 471484 - YCII superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449153 Thaps20629.3, Thaps20629.2, Thaps20629.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0270
 0.28

Most Highly Correlated Transcripts

268880

WD40 superfamily
0.9198

24834

hypothetical protein
0.911

37374

PseudoU_synth superfamily
0.9026

36186

iojap_ybeB
0.8855

5532

hypothetical protein
0.8796

268350

SpoU_methylase
0.8744

22499

TrmA
0.8737

1374

RRM
0.8681

bd1709

(bd1709) NA
0.8674

34413

RRM_ABT1_like
0.8667

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YCII superfamily YCII-related domain; The majority of proteins in this family consist of a single copy of this... - 62.6116 1.86E-12 229 - 320 superfamily 260739

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_44072 PHATR_44072 277739 191799 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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