31216 AAT_I superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31216 chr_1 AAT_I superfamily 1521929 1523530 + AAT_I superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449146 Thaps31216.1, Thaps31216.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0214
 0.34

Most Highly Correlated Transcripts

268911

methyl transferase
0.8604

261407

NAD_binding_8 superfamily
0.8583

9485

mTERF superfamily
0.8566

268474

PLN02657
0.8555

33868

EHD
0.8517

268908

Trans_IPPS_HH
0.8492

262977

NA
0.8436

24792

U-box superfamily
0.8421

39841

ArsA_ATPase
0.8418

9037

hypothetical protein
0.8376

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 342.138 2.50E-113 49 - 451 superfamily 267298
bioF 8-amino-7-oxononanoate synthase; 7-keto-8-aminopelargonic acid synthetase is an alternate name.... - 287.243 2.45E-92 85 - 451 multi-dom 129937

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_36165 PHATRDRAFT_36165 223496 152882 Not available Not available AT5G04620.2 249080

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0009058 GO:0016769 GO:0008710 -

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016769

transferase activity, transferring nitrogenous groups

Details: 
Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0008710

8-amino-7-oxononanoate synthase activity

Details: 
Catalysis of the reaction: L-alanine + H(+) + pimelyl-CoA = 8-amino-7-oxononanoate + CO(2) + CoA.
GO Category: 
MF

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