3142 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3142 chr_3 Mito_carr 234914 236123 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7442470 Thaps3142.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0021

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0051
 0.39

Most Highly Correlated Transcripts

bd1757

(bd1757) NA
0.8986

268592

VDE superfamily
0.8438

7458

Asp_Arg_Hydrox superfamily
0.8423

17214

PLN02512
0.8381

5555

PAP_fibrillin superfamily
0.838

31829

CBS_like
0.8341

32153

(HDP1) PLN02875
0.8338

bd211

(bd211) Maf_Ham1 superfamily
0.8321

8720

NA
0.8282

34093

COG1691
0.8279

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 63.4223 1.17E-12 303 - 395 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 63.4223 1.17E-12 303 - 395 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9885 PHATRDRAFT_9885 140785 153648 432184 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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