6715 DUF1501 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6715	chr_7	DUF1501 superfamily	295642	304167	-	DUF1501 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448939	Thaps6715.9, Thaps6715.21, Thaps6715.10, Thaps6715.15, Thaps6715.3, Thaps6715.16, Thaps6715.17, Thaps6715.20, Thaps6715.19, Thaps6715.4, Thaps6715.18, Thaps6715.12, Thaps6715.13, Thaps6715.6, Thaps6715.5, Thaps6715.14, Thaps6715.2, Thaps6715.8, Thaps6715.7, Thaps6715.11, Thaps6715.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0151

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9635	bd2028 (bd2028) NA 0.8869	bd1863 (bd1863) NA 0.8852	bd1339 (bd1339) psaD 0.8711	24063 COG3899 0.868	bd1652 (bd1652) ABC_ATPase superfamily 0.8657
263610 COG3899 0.8599	22882 PUB 0.8573	bd1820 (bd1820) Fasciclin 0.8556	263599 COG3899 0.8544

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF1501 superfamily		Protein of unknown function (DUF1501); This family contains a number of hypothetical bacterial...	-	107.015	2.44E-24	910 - 1294	superfamily	268208
DUF1800 superfamily		Protein of unknown function (DUF1800); This is a family of large bacterial proteins of unknown...	-	106.19	6.36E-24	610 - 907	superfamily	268242

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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