8962 2a58
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8962 chr_12 2a58 160445 162832 - 2a58

Synonyms

NCBI ID Ensembl Genomes exon ID
7443242 Thaps8962.3, Thaps8962.4, Thaps8962.1, Thaps8962.5, Thaps8962.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0353

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0087
 0.32

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.854

262521

WD40 superfamily
0.8488

261324

PLN02724
0.8436

37497

cysE
0.8425

15114

Zinc_peptidase_like superfamily
0.8397

25311

hypothetical protein
0.832

12899

AAA
0.8303

21839

Symplekin_C
0.8281

22716

TH1 superfamily
0.828

4019

hypothetical protein
0.8253

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Na_Pi_cotrans superfamily Na+/Pi-cotransporter; This is a family of mainly mammalian type II renal Na+/Pi-cotransporters with... - 80.2369 1.04E-17 323 - 467 superfamily 251479
Na_Pi_cotrans superfamily Na+/Pi-cotransporter; This is a family of mainly mammalian type II renal Na+/Pi-cotransporters with... - 80.2369 1.04E-17 323 - 467 superfamily 251479
Na_Pi_cotrans superfamily Na+/Pi-cotransporter; This is a family of mainly mammalian type II renal Na+/Pi-cotransporters with... - 80.2369 1.04E-17 323 - 467 superfamily 251479
Na_Pi_cotrans superfamily Na+/Pi-cotransporter; This is a family of mainly mammalian type II renal Na+/Pi-cotransporters with... - 80.2369 1.04E-17 323 - 467 superfamily 251479
2a58 Phosphate:Na+ Symporter (PNaS) Family; [Transport and binding proteins, Cations and iron carrying... - 232.829 6.51E-69 64 - 532 multi-dom 162157

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006817 GO:0015321 GO:0016020 -

GO:0006817

phosphate ion transport

Details: 
The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0015321

sodium-dependent phosphate transmembrane transporter activity

Details: 
Catalysis of the transfer of phosphate (PO4 3-) ions from one side of a membrane to the other, requiring sodium ions.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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