ThpsCt001 (trnM(cau)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt001	chloroplast	(trnM(cau))	5990	6074	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524817	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0255

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0052	0.43	12000 16

Most Highly Correlated Transcripts

bd598 (bd598) atpG 0.9808	bd1318 (bd1318) atpF 0.9796	bd1378 (bd1378) atpI 0.9756	bd1290 (bd1290) atpH 0.9747	bd2088 (bd2088) rbcL 0.9726	bd1023 (bd1023) atpD 0.9722
bd467 (bd467) Cytochrome_b_N 0.9642	bd1563 (bd1563) atpB 0.9605	bd794 (bd794) NA 0.9554	bd1720 (bd1720) ftsH 0.9489

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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