10552 Beta_propelThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10552	chr_17	Beta_propel	47739	50740	-	Beta_propel

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450332	Thaps10552.3, Thaps10552.2, Thaps10552.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0302

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0273	0.40	0.4 55

Most Highly Correlated Transcripts

25205 Beta_propel 0.9631	24858 hypothetical protein 0.8714	4866 PROCN 0.8678	2941 hypothetical protein 0.8653	11315 CAP10 superfamily 0.862	264740 ABC_subfamily_A 0.8577
2942 hypothetical protein 0.8567	23932 hypothetical protein 0.8541	2070 hypothetical protein 0.8474	25280 hypothetical protein 0.8468

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Beta_propel		Beta propeller domain; Members of this family comprise secreted bacterial proteins containing C-...	-	231.026	5.24E-66	294 - 874	multi-dom	255588

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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