Phatr_hclust_0046 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0005975 carbohydrate metabolism 0.000527023 1 Phatr_hclust_0046
GO:0007218 neuropeptide signaling pathway 0.00617436 1 Phatr_hclust_0046
GO:0006003 fructose 2,6-bisphosphate metabolism 0.0123121 1 Phatr_hclust_0046
GO:0006811 ion transport 0.0659386 1 Phatr_hclust_0046
GO:0016310 phosphorylation 0.0831845 1 Phatr_hclust_0046
GO:0051341 regulation of oxidoreductase activity 0.0945115 1 Phatr_hclust_0046
GO:0006470 protein amino acid dephosphorylation 0.11125 1 Phatr_hclust_0046
GO:0006306 DNA methylation 0.116764 1 Phatr_hclust_0046
GO:0008033 tRNA processing 0.116764 1 Phatr_hclust_0046
GO:0006812 cation transport 0.154448 1 Phatr_hclust_0046

Members

PHATRDRAFT_43070 :
PHATRDRAFT_6606 : (DUF1279 superfamily)
PHATRDRAFT_50511 : (Bestrophin superfamily)
PHATRDRAFT_43271 : mgc114783 protein
PHATRDRAFT_50430 :
PHATRDRAFT_23375 : dihydrouridine synthase (DUS_like_FMN)
PHATRDRAFT_32173 : peroxisomal targeting sequence 1 receptor (TPR)
PHATRDRAFT_37749 : protein n-methyltransferase
PHATRDRAFT_12881 : carbohydrate kinase fggy (NBD_sugar-kinase_HSP70_actin superfamily)
PHATRDRAFT_47322 :
PHATRDRAFT_48470 :
PHATRDRAFT_42891 :
PHATRDRAFT_12668 : ribulose-phosphate 3-epimerase (RPE)
PHATRDRAFT_23292 : l-galactono--lactone dehydrogenase (PLN02465)
PHATRDRAFT_17495 : fructose-6-phosphate 2-kinase fructose--biphosphatase (AAA_17 superfamily)
PHATRDRAFT_49552 : purine nucleoside permease (Cupin_5 superfamily)
PHATRDRAFT_2793 : chloroplast fructose--bisphosphatase (FBPase)
PHATRDRAFT_45364 : wd-repeat protein (WD40 superfamily)
PHATRDRAFT_32851 : c1galt1-specific chaperone 1
PHATRDRAFT_49782 : guanine cytosine deaminase (CumB)
PHATRDRAFT_42527 : sugarpossible xylulose kinase (NBD_sugar-kinase_HSP70_actin superfamily)
PHATRDRAFT_43649 : nadph-dependent fmn fad containing (FNR_like superfamily)
PHATRDRAFT_47101 :
PHATRDRAFT_44159 : ribosomal protein l11 methyltransferase (prmA)
PHATRDRAFT_47677 :
PHATRDRAFT_49250 :
PHATRDRAFT_49860 : phagocytosis and cell motility protein elmo1-related (ELMO_CED12 superfamily)
PHATRDRAFT_50961 : mitochondrial pyruvate dehydrogenase kinase (BCDHK_Adom3)
PHATRDRAFT_44745 : ubiquitin specific protease 22 (Peptidase_C19 superfamily)
PHATRDRAFT_43751 :
PHATRDRAFT_42245 : electron transfer flavoprotein-ubiquinonemitochondrial precursor (FixC)
PHATRDRAFT_50288 :
PHATRDRAFT_50075 : (SUL1)
PHATRDRAFT_44973 :
PHATRDRAFT_47649 :
PHATRDRAFT_20755 : propanediol diffusion facilitator (MIP superfamily)
PHATRDRAFT_46878 :
PHATRDRAFT_45891 :
PHATRDRAFT_46245 : retinoblastoma-associated protein (RB_B superfamily)
PHATRDRAFT_48157 : abscisic insensitive 1b (PP2Cc)
PHATRDRAFT_33371 : (DUF303 superfamily)
PHATRDRAFT_50212 : ribosome recycling factor (RRF)
PHATRDRAFT_48259 :
PHATRDRAFT_32822 :
PHATRDRAFT_42834 : kelch motif family protein (BTB)
PHATRDRAFT_43496 :
PHATRDRAFT_46737 : vad1 (vascular associated death1)
PHATRDRAFT_47431 : ser thr protein phosphatase familyexpressed (acc_ester superfamily)
PHATRDRAFT_25495 : dna-directed polymerase kappa (PolY_Pol_IV_kappa)
PHATRDRAFT_46959 : methyltransferase nucleic acid binding (COG1041)
PHATRDRAFT_48601 : uncharacterized conserved protein (DUF1365 superfamily)
PHATRDRAFT_44758 : small multidrug resistance protein (EmrE)
PHATRDRAFT_48763 : cyclin h-1 (ccl1)
PHATRDRAFT_42595 : phd finger protein 8 (JmjC superfamily)
PHATRDRAFT_46742 : mc family transporter
PHATRDRAFT_43213 :
PHATRDRAFT_9896 : (AFD_class_I superfamily)
PHATRDRAFT_37212 : sac3 ganp domain protein (SAC3_GANP)
PHATRDRAFT_49776 : nod3 protein (LRR_RI superfamily)
PHATRDRAFT_47578 : (Methyltransf_16 superfamily)
PHATRDRAFT_11733 : mitochondrial creatine kinase (phosphagen_kinases superfamily)
PHATRDRAFT_18064 : dci protein (ECH)

Conditions

Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h 0.212 0.113889
Copper_SH Copper_SH 0.114 0.0897849
Green_vs_Red_24h Green_vs_Red_24h 0.294 0.00178571
Silver_SH Silver_SH 0.100 0.120455
Cadmium_1.2mg Cadmium_1.2mg 0.048 0.295047
BlueLight_24h BlueLight_24h -0.401 0.00128205
GreenLight_0.5h GreenLight_0.5h -2.003 0.000458716
RedLight_6h RedLight_6h -0.999 0.000694444
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 0.980594
GreenLight_24h GreenLight_24h -0.503 0.000961538
light_6hr light_6hr -0.191 0.152015
dark_8hr_light_3hr dark_8hr_light_3hr -0.066 0.623953
Blue_vs_Green_6h Blue_vs_Green_6h -0.023 0.776956
Ammonia_SH Ammonia_SH -0.562 0.000344828
Simazine_SH Simazine_SH 0.303 0.000423729
Oil_SH Oil_SH -0.002 0.983097
Salinity_15ppt_SH Salinity_15ppt_SH 0.100 0.180031
Cadmium_SH Cadmium_SH -0.275 0.000666667
Blue_vs_Red_24h Blue_vs_Red_24h 0.396 0.00166667
highlight_0to6h highlight_0to6h -0.368 0.000806452
BlueLight_0.5h BlueLight_0.5h -1.839 0.000462963
Dispersant_SH Dispersant_SH 0.056 0.431039
light_16hr_dark_4hr light_16hr_dark_4hr -0.221 0.00522388
light_15.5hr light_15.5hr -0.445 0.00172414
light_10.5hr light_10.5hr -0.099 0.571607
Dispersed_oil_SH Dispersed_oil_SH -0.146 0.0432161
Si_free Si_free 0.122 0.25
Re-illuminated_0.5h Re-illuminated_0.5h -2.267 0.000396825
Mixture_SH Mixture_SH -0.601 0.000357143
Blue_vs_Red_6h Blue_vs_Red_6h 0.793 0.0016129
light_16hr_dark_30min light_16hr_dark_30min -0.312 0.0161157
BlueLight_6h BlueLight_6h -0.205 0.034264
highlight_12to48h highlight_12to48h -0.578 0.000555556
RedLight_24h RedLight_24h -0.797 0.000943396
Dark_treated Dark_treated 1.183 0.000446429
GreenLight_6h GreenLight_6h -0.182 0.0766529
Cadmium_0.12mg Cadmium_0.12mg 0.025 0.33191
Blue_vs_Green_24h Blue_vs_Green_24h 0.102 0.0197917
RedLight_0.5h RedLight_0.5h -2.343 0.000555556
Green_vs_Red_6h Green_vs_Red_6h 0.816 0.0015625
Re-illuminated_24h Re-illuminated_24h -0.487 0.000657895

Motifs

MEME Output