Phatr_hclust_0142 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0016089 | aromatic amino acid family biosynthesis, shikimate pathway | 0.00691529 | 1 | Phatr_hclust_0142 |
| GO:0006434 | seryl-tRNA aminoacylation | 0.0137845 | 1 | Phatr_hclust_0142 |
| GO:0009082 | branched chain family amino acid biosynthesis | 0.0137845 | 1 | Phatr_hclust_0142 |
| GO:0006419 | alanyl-tRNA aminoacylation | 0.0206078 | 1 | Phatr_hclust_0142 |
| GO:0006423 | cysteinyl-tRNA aminoacylation | 0.0206078 | 1 | Phatr_hclust_0142 |
| GO:0006412 | protein biosynthesis | 0.023407 | 1 | Phatr_hclust_0142 |
| GO:0006537 | glutamate biosynthesis | 0.0341181 | 1 | Phatr_hclust_0142 |
| GO:0042254 | ribosome biogenesis and assembly | 0.0408058 | 1 | Phatr_hclust_0142 |
| GO:0044267 | cellular protein metabolism | 0.0671124 | 1 | Phatr_hclust_0142 |
| GO:0006820 | anion transport | 0.0800035 | 1 | Phatr_hclust_0142 |
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PHATRDRAFT_48010 : mpt family transporter: outer membrane translocasetom40 (Porin3_Tom40) |
PHATRDRAFT_26346 : cysteinyl-trna synthetase (PTZ00399) |
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PHATRDRAFT_13088 : eukaryotic translation initiation factorsubunit 7 (eIF-3_zeta) |
PHATRDRAFT_12238 : 50s ribosomal protein l4 (Ribosomal_L4 superfamily) |
PHATRDRAFT_31994 : chloroplast fructose--bisphosphatase (FBPase) |
PHATRDRAFT_47492 : mgc68780 protein (TPR) |
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PHATRDRAFT_31768 : elongation factor ts (tsf) |
PHATRDRAFT_30572 : seryl-trna synthetase (PLN02678) |
PHATRDRAFT_47181 : heat shock transcription factor 4 isoform 2 (HSF_DNA-bind) |
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PHATRDRAFT_47412 : (DEXDc) |
PHATRDRAFT_26363 : hypothetical isochorismatase family protein (cysteine_hydrolases) |
PHATRDRAFT_43431 : im:6900357 protein (WD40 superfamily) |
PHATRDRAFT_23371 : gtp-binding protein (odn superfamily) (PTZ00258) |
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PHATRDRAFT_46712 : trna methyltransferase |
PHATRDRAFT_35513 : prpl12 chloroplast ribosomal protein l12 (Ribosomal_L7_L12) |
PHATRDRAFT_24739 : (gltB) |
PHATRDRAFT_18246 : 5-enolpyruvylshikimate-3-phosphate synthase (PLN02338) |
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PHATRDRAFT_21485 : eukaryotic translation initiation factorsubunit 6 (eIF3_N) |
PHATRDRAFT_39247 : d-amino acid dehydrogenase (DadA) |
PHATRDRAFT_14917 : methionyl-trna formyltransferase (PLN02285) |
PHATRDRAFT_34538 : eukaryotic translation initiation factor 2 alpha subunit (eif-2-alpha) (PTZ00248) |
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PHATRDRAFT_22525 : ubiquitin conjugating enzyme (UBCc) |
PHATRDRAFT_14715 : 50s ribosomal protein l10 (Ribosomal_L10) |
PHATRDRAFT_50738 : triosephosphate isomerase (TIM) |
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PHATRDRAFT_22666 : chaperonin subunit 6a (TCP1_zeta) |
PHATRDRAFT_23959 : poly a bindingcytoplasmic 1 (PABP-1234) |
PHATRDRAFT_47999 : ac007980_9cytosolic trna-ala synthetase (PLN02900) |
PHATRDRAFT_16074 : non-specific dna-binding protein (HU) |
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PHATRDRAFT_54376 : (DnaJ) |
PHATRDRAFT_30967 : acetohydroxy acid isomeroreductase (ilvC) |
PHATRDRAFT_42754 : (RRM_SF) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | -0.600 | 0.000505051 |
| Copper_SH | Copper_SH | 0.167 | 0.0461382 |
| Green_vs_Red_24h | Green_vs_Red_24h | 0.207 | 0.0381944 |
| Silver_SH | Silver_SH | 0.026 | 0.736304 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.116 | 0.0262376 |
| BlueLight_24h | BlueLight_24h | 0.005 | 0.988956 |
| GreenLight_0.5h | GreenLight_0.5h | -0.677 | 0.012013 |
| RedLight_6h | RedLight_6h | -0.676 | 0.000694444 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 1 |
| GreenLight_24h | GreenLight_24h | -0.083 | 0.623913 |
| light_6hr | light_6hr | -0.805 | 0.000561798 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | -0.378 | 0.0141791 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | 0.056 | 0.52378 |
| Ammonia_SH | Ammonia_SH | 1.746 | 0.000344828 |
| Simazine_SH | Simazine_SH | -0.333 | 0.000423729 |
| Oil_SH | Oil_SH | 0.184 | 0.0336022 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | -0.055 | 0.545047 |
| Cadmium_SH | Cadmium_SH | -0.252 | 0.0126543 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | 0.295 | 0.0184211 |
| highlight_0to6h | highlight_0to6h | 0.443 | 0.000806452 |
| BlueLight_0.5h | BlueLight_0.5h | -0.897 | 0.00761589 |
| Dispersant_SH | Dispersant_SH | -0.018 | 0.865376 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | -0.073 | 0.464053 |
| light_15.5hr | light_15.5hr | -0.162 | 0.416938 |
| light_10.5hr | light_10.5hr | -1.114 | 0.000561798 |
| Dispersed_oil_SH | Dispersed_oil_SH | 0.147 | 0.104102 |
| Si_free | Si_free | -0.017 | 0.87234 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | -0.789 | 0.00933735 |
| Mixture_SH | Mixture_SH | 1.452 | 0.000357143 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.047 | 0.83883 |
| light_16hr_dark_30min | light_16hr_dark_30min | -0.057 | 0.830807 |
| BlueLight_6h | BlueLight_6h | -0.629 | 0.000581395 |
| highlight_12to48h | highlight_12to48h | 1.078 | 0.000555556 |
| RedLight_24h | RedLight_24h | -0.290 | 0.0173267 |
| Dark_treated | Dark_treated | -2.337 | 0.000446429 |
| GreenLight_6h | GreenLight_6h | -0.685 | 0.000609756 |
| Cadmium_0.12mg | Cadmium_0.12mg | 0.007 | 0.889104 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | 0.088 | 0.143697 |
| RedLight_0.5h | RedLight_0.5h | -0.591 | 0.0384848 |
| Green_vs_Red_6h | Green_vs_Red_6h | -0.010 | 0.959158 |
| Re-illuminated_24h | Re-illuminated_24h | 0.128 | 0.276736 |
