39540 Alpha_ANH_like_IIThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
39540	chr_2	Alpha_ANH_like_II	1195060	1197041	+	Alpha_ANH_like_II

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444671	Thaps39540.2, Thaps39540.4, Thaps39540.5, Thaps39540.3, Thaps39540.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0220

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0110	0.24	0.65 18

Most Highly Correlated Transcripts

32395 RNA_pol 0.9607	262041 MIF4G 0.9507	bd1876 (bd1876) NatB_MDM20 superfamily 0.9469	263641 InfB 0.933	268598 COG1094 0.9305	8541 PRK00142 0.9296
268766 MdlB 0.9255	27873 PLN02274 0.924	25139 RRN3 superfamily 0.9237	11949 Nop14 0.9232

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Alpha_ANH_like_II		This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha...	cl00292	183.603	7.39E-55	155 - 334	specific	238951
AANH_like superfamily		Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases...	-	183.603	7.39E-55	155 - 334	superfamily	260331

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_4708	PHATRDRAFT_4708	262478	245063	462145	Not available	Not available	557789

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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