4590 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4590 chr_4 hypothetical protein 1416605 1417558 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7446134 Thaps4590.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0151

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0033
 0.48

Most Highly Correlated Transcripts

267979

HCO3_cotransp superfamily
0.8933

6028

NA
0.8777

268443

SAICAR_synt_Sc
0.8555

264699

ATS1
0.8536

268362

(Tp_AP2-EREBP2) regulator [Rayko]
0.8523

bd651

(bd651) HMGB-UBF_HMG-box
0.8479

36007

Aldolase_II superfamily
0.8449

6825

hypothetical protein
0.8435

11455

EXS
0.8434

16743

Peptidase_M48 superfamily
0.8418

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 255682 171690 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008237 GO:0008270 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008237

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

Add comment

Log in to post comments