Organism : Geobacter sulfurreducens | Module List :
PAP2 family protein (VIMSS)
Functional Annotations (2)
|hydrolase activity||go/ molecular_function|
Regulation information for GSU1840(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for GSU1840
|hydrolase activity||go/ molecular_function|
Module neighborhood information for GSU1840
|Gene||Common Name||Description||Module membership|
|GSU0085||GSU0085||heterodisulfide reductase, cytochrome reductase subunit (VIMSS)||8, 196|
|GSU0086||GSU0086||hypothetical protein (VIMSS)||8, 323|
|GSU0289||GSU0289||conserved hypothetical protein (VIMSS)||8, 253|
|GSU0316||GSU0316||hypothetical protein (VIMSS)||8, 191|
|GSU0512||GSU0512||conserved hypothetical protein (VIMSS)||8, 278|
|GSU0513||GSU0513||dephospho-CoA kinase (VIMSS)||212, 219|
|GSU0703||GSU0703||hypothetical protein (VIMSS)||8, 129|
|GSU0821||GSU0821||conserved hypothetical protein (VIMSS)||8, 75|
|GSU0879||cheV||chemotaxis protein CheV (NCBI)||8, 212|
|GSU0934||GSU0934||hypothetical protein (VIMSS)||8, 164|
|GSU1011||GSU1011||hypothetical protein (VIMSS)||208, 219|
|GSU1048||GSU1048||SEC-C motif domain protein (VIMSS)||8, 47|
|GSU1173||ogt||methylated-DNA--protein-cysteine methyltransferase, putative (NCBI)||219, 222|
|GSU1216||cydC||transport ATP-binding protein CydC (NCBI)||8, 181|
|GSU1282||GSU1282||hypothetical protein (VIMSS)||98, 219|
|GSU1287||GSU1287||methyl accepting chemotaxis protein, putative (VIMSS)||8, 131|
|GSU1311||glk||glucose-6-phosphate isomerase (NCBI)||8, 205|
|GSU1313||GSU1313||carboxymuconolactone decarboxylase (VIMSS)||43, 219|
|GSU1419||GSU1419||transcriptional regulator, Cro/CI family (VIMSS)||219, 236|
|GSU1421||GSU1421||nuclease SbcCD, D subunit, putative (NCBI)||212, 219|
|GSU1422||GSU1422||nuclease SbcCD, C subunit, putative (NCBI)||212, 219|
|GSU1531||hisI||phosphoribosyl-AMP cyclohydrolase (NCBI)||219, 255|
|GSU1544||GSU1544||hypothetical protein (VIMSS)||8, 105|
|GSU1578||mutA||B12-binding protein (NCBI)||139, 219|
|GSU1579||GSU1579||LAO/AO transport system ATPase (VIMSS)||219, 231|
|GSU1580||GSU1580||ErfK/YbiS/YcfS/YnhG family protein (NCBI)||68, 219|
|GSU1657||GSU1657||DNA internalization-related competence protein ComEC/Rec2 (VIMSS)||8, 225|
|GSU1668||GSU1668||hypothetical protein (VIMSS)||219, 324|
|GSU1730||livF||branched-chain amino acid ABC transporter, ATP-binding protein (NCBI)||219, 255|
|GSU1823||GSU1823||hypothetical protein (VIMSS)||8, 140|
|GSU1839||GSU1839||hydrolase, haloacid dehalogenase-like family (VIMSS)||98, 219|
|GSU1840||GSU1840||PAP2 family protein (VIMSS)||8, 219|
|GSU1928||GSU1928||sensor histidine kinase/response regulator (VIMSS)||219, 324|
|GSU1998||GSU1998||transporter, putative (VIMSS)||8, 99|
|GSU2026||aroK||shikimate kinase (NCBI)||219, 221|
|GSU2027||aroC||chorismate synthase (NCBI)||139, 219|
|GSU2099||GSU2099||sensory box protein, putative (VIMSS)||8, 276|
|GSU2332||GSU2332||hypothetical protein (VIMSS)||8, 47|
|GSU2622||GSU2622||HAMP domain/GAF domain/HD domain protein (NCBI)||8, 269|
|GSU2956||GSU2956||redox-active disulfide protein 2 (VIMSS)||43, 219|
|GSU2976||GSU2976||DedA family protein (VIMSS)||8, 176|
|GSU3310||GSU3310||hypothetical protein (VIMSS)||8, 47|
|GSU3382||GSU3382||hypothetical protein (VIMSS)||8, 176|
|GSU3384||GSU3384||cardiolipin synthetase, putative (VIMSS)||8, 231|
|GSU3463||gidB||glucose-inhibited division protein B (NCBI)||8, 71|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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