Organism : Geobacter sulfurreducens | Module List :
Regulation information for GSU2580(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for GSU2580
|Gene||Common Name||Description||Module membership|
|GSU0063||GSU0063||conserved hypothetical protein (VIMSS)||79, 141|
|GSU0120||GSU0120||hydrogenase maturation protease (VIMSS)||82, 141|
|GSU0264||GSU0264||drug resistance transporter, Bcr/CflA family (VIMSS)||82, 141|
|GSU0275||GSU0275||hypothetical protein (VIMSS)||82, 141|
|GSU0278||GSU0278||outer membrane efflux protein (VIMSS)||82, 141|
|GSU0400||GSU0400||methyl-accepting chemotaxis protein (VIMSS)||82, 156|
|GSU0425||fliR||flagellar biosynthesis protein FliR (NCBI)||82, 141|
|GSU0426||flhB||flagellar biosynthetic protein FlhB (NCBI)||82, 275|
|GSU0766||GSU0766||methyl-accepting chemotaxis protein, putative (VIMSS)||82, 272|
|GSU0822||GSU0822||sensory box histidine kinase (VIMSS)||6, 141|
|GSU0920||GSU0920||hypothetical protein (NCBI)||82, 296|
|GSU0951||GSU0951||transcriptional regulator, TetR family (VIMSS)||82, 296|
|GSU1097||pstA||phosphate ABC transporter, permease protein (NCBI)||82, 141|
|GSU1294||GSU1294||methyl-accepting chemotaxis protein (VIMSS)||82, 190|
|GSU1304||GSU1304||methyl-accepting chemotaxis protein (VIMSS)||82, 155|
|GSU1751||GSU1751||hypothetical protein (VIMSS)||59, 141|
|GSU1752||efp-2||translation elongation factor P (NCBI)||56, 141|
|GSU2160||GSU2160||hypothetical protein (VIMSS)||78, 82|
|GSU2186||GSU2186||conserved hypothetical protein (VIMSS)||82, 190|
|GSU2187||GSU2187||ABC transporter, permease protein (VIMSS)||82, 190|
|GSU2188||GSU2188||ABC transporter, ATP-binding protein (VIMSS)||82, 190|
|GSU2189||GSU2189||sensor histidine kinase (VIMSS)||82, 190|
|GSU2295||GSU2295||hypothetical protein (VIMSS)||141, 278|
|GSU2296||GSU2296||HD domain protein (VIMSS)||141, 266|
|GSU2299||GSU2299||cytochrome c family protein (NCBI)||82, 141|
|GSU2385||GSU2385||hypothetical protein (VIMSS)||82, 278|
|GSU2388||GSU2388||sensory box histidine kinase (VIMSS)||82, 155|
|GSU2401||GSU2401||sensory box histidine kinase/response regulator (VIMSS)||82, 141|
|GSU2502||GSU2502||spermine/spermidine synthase family protein (VIMSS)||141, 341|
|GSU2530||GSU2530||GTPase YjeQ (NCBI)||45, 141|
|GSU2531||GSU2531||sensory box histidine kinase (VIMSS)||79, 82|
|GSU2535||GSU2535||response regulator (VIMSS)||82, 224|
|GSU2575||GSU2575||sensor histidine kinase/response regulator (VIMSS)||40, 141|
|GSU2579||GSU2579||methyl-accepting chemotaxis protein (VIMSS)||36, 141|
|GSU2580||GSU2580||hypothetical protein (VIMSS)||82, 141|
|GSU2671||GSU2671||hypothetical protein (VIMSS)||82, 304|
|GSU2684||GSU2684||hypothetical protein (VIMSS)||141, 159|
|GSU2790||GSU2790||hypothetical protein (VIMSS)||65, 141|
|GSU3030||GSU3030||hypothetical protein (VIMSS)||6, 141|
|GSU3047||flgI||flagellar P-ring protein FlgI (NCBI)||141, 186|
|GSU3104||prfA||peptide chain release factor 1 (NCBI)||82, 140|
|GSU3154||GSU3154||cytochrome c nitrite reductase, catalytic subunit NrfA, putative (VIMSS)||16, 82|
|GSU3221||GSU3221||cytochrome c family protein (NCBI)||6, 82|
|GSU3227||GSU3227||hypothetical protein (VIMSS)||82, 141|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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Identity of gene members in a module may help to identify potential interactions between different functional modules. Therefore, neighbor genes that share the same module(s) with gene under consideration are shown here. For each memebr, gene name, description and modules that contain it are listed.
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