Organism : Geobacter sulfurreducens | Module List :
Regulation information for GSU3180(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for GSU3180
Module neighborhood information for GSU3180
|Gene||Common Name||Description||Module membership|
|GSU0105||GSU0105||cytochrome c family protein, putative (NCBI)||180, 181|
|GSU0282||GSU0282||hypothetical protein (VIMSS)||36, 180|
|GSU0763||GSU0763||helicase, putative (NCBI)||130, 180|
|GSU0831||GSU0831||nitrogen regulatory protein P-II, putative (VIMSS)||27, 180|
|GSU0833||GSU0833||hypothetical protein (VIMSS)||180, 278|
|GSU1032||GSU1032||methyl-accepting chemotaxis protein (VIMSS)||1, 337|
|GSU1037||GSU1037||sensory box/response regulator (VIMSS)||1, 224|
|GSU1095||phoU||phosphate transport system regulatory protein PhoU (NCBI)||1, 96|
|GSU1214||GSU1214||tetracenomycin polyketide synthesis 8-o-methyltransferase, putative (NCBI)||148, 180|
|GSU1302||GSU1302||sensor histidine kinase/response regulator (VIMSS)||79, 180|
|GSU1407||GSU1407||hypothetical protein (VIMSS)||1, 268|
|GSU1542||GSU1542||transcriptional regulator, Cro/CI family (VIMSS)||180, 235|
|GSU1581||GSU1581||polyA polymerase family protein (NCBI)||130, 180|
|GSU2094||GSU2094||response regulator (VIMSS)||1, 287|
|GSU2095||GSU2095||NADH oxidase, putative (VIMSS)||1, 79|
|GSU2098||cooS||carbon monoxide dehydrogenase subunit (NCBI)||1, 178|
|GSU2115||GSU2115||hypothetical protein (VIMSS)||1, 16|
|GSU2152||GSU2152||hypothetical protein (VIMSS)||1, 213|
|GSU2154||GSU2154||hypothetical protein (VIMSS)||1, 337|
|GSU2156||GSU2156||hypothetical protein (VIMSS)||1, 70|
|GSU2158||norQ||cobS protein, putative (NCBI)||1, 322|
|GSU2162||GSU2162||hypothetical protein (VIMSS)||1, 224|
|GSU2165||GSU2165||hypothetical protein (VIMSS)||1, 78|
|GSU2166||GSU2166||hypothetical protein (VIMSS)||1, 300|
|GSU2167||GSU2167||CHC2 zinc finger domain protein (VIMSS)||1, 78|
|GSU2168||radC||DNA repair protein RadC (NCBI)||1, 163|
|GSU2374||GSU2374||hypothetical protein (VIMSS)||63, 180|
|GSU2421||GSU2421||hypothetical protein (VIMSS)||1, 190|
|GSU2512||GSU2512||hypothetical protein (VIMSS)||21, 180|
|GSU2532||GSU2532||conserved hypothetical protein (VIMSS)||180, 283|
|GSU2658||GSU2658||lipoprotein, putative (VIMSS)||180, 337|
|GSU2661||GSU2661||conserved hypothetical protein (VIMSS)||1, 287|
|GSU2679||GSU2679||conserved hypothetical protein (VIMSS)||155, 180|
|GSU2774||GSU2774||hypothetical protein (VIMSS)||180, 232|
|GSU2776||GSU2776||conserved hypothetical protein (NCBI)||1, 9|
|GSU3119||GSU3119||sensor histidine kinase (VIMSS)||180, 278|
|GSU3121||GSU3121||EF hand domain protein (VIMSS)||1, 224|
|GSU3180||GSU3180||conserved hypothetical protein (VIMSS)||1, 180|
|GSU3361||GSU3361||transglutaminase domain protein (NCBI)||180, 181|
|GSU3400||GSU3400||heavy metal efflux pump, CzcA family (VIMSS)||1, 337|
|GSU3426||GSU3426||hypothetical protein (VIMSS)||148, 180|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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