Organism : Halobacterium salinarum NRC-1 | Module List :
Regulation information for VNG1394H(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 8 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for VNG1394H
|Gene||Common Name||Description||Module membership|
|VNG0117H||hypothetical protein VNG0117H||72, 207, 209, 243, 298|
|VNG0138H||hypothetical protein VNG0138H||57, 209, 298|
|VNG0243Cm||truD||tRNA pseudouridine synthase D||86, 130, 209, 298|
|VNG0298H||hypothetical protein VNG0298H||57, 269, 298|
|VNG0301C||nicotinamide-nucleotide adenylyltransferase||57, 298|
|VNG0407H||hypothetical protein VNG0407H||139, 298|
|VNG0498C||hypothetical protein VNG0498C||139, 298|
|VNG0499G||cna||proliferating-cell nucleolar antigen||57, 86, 139, 209, 298|
|VNG0595H||hypothetical protein VNG0595H||139, 209, 298|
|VNG0622H||hypothetical protein VNG0622H||139, 209, 298|
|VNG0761G||dip3||competence-damage protein CinA-like||44, 151, 214|
|VNG0818C||hypothetical protein VNG0818C||86, 106, 243, 298|
|VNG0875Cm||Zn-dependent protease||139, 298|
|VNG0938G||gufA||GufA protein||57, 86, 139, 209, 298|
|VNG1365C||hypothetical protein VNG1365C||103, 104, 214|
|VNG1371Gm||btuD||corrinoid ABC transporter ATPase||95, 103, 104, 214|
|VNG1372C||hypothetical protein VNG1372C||95, 104, 214|
|VNG1394H||hypothetical protein VNG1394H||86, 209, 214, 298|
|VNG1455H||hypothetical protein VNG1455H||26, 31, 57, 86|
|VNG1470G||pri||DNA primase small subunit||139, 298|
|VNG1574G||cobI||cobalamin adenosyltransferase||86, 210|
|VNG1785G||panF||hypothetical protein VNG1785G||57, 86, 232, 243, 298|
|VNG1788C||hypothetical protein VNG1788C||186, 209|
|VNG1815G||carA||carbamoyl phosphate synthase small subunit||68, 86, 209, 257, 294, 298|
|VNG1816G||trh3||transcription regulator||68, 86, 139, 209, 238, 257, 298|
|VNG1818G||idi||Idi||68, 86, 209, 214, 234, 257|
|VNG1917H||hypothetical protein VNG1917H||139, 209, 298|
|VNG2087G||hisH||imidazole glycerol phosphate synthase subunit HisH||86, 106, 209, 298|
|VNG2156C||hypothetical protein VNG2156C||57, 106, 209, 243, 298|
|VNG2270G||mutS3||hypothetical protein VNG2270G||57, 86, 298|
|VNG2335H||hypothetical protein VNG2335H||57, 86, 106, 139, 209, 257, 298|
|VNG2501C||hypothetical protein VNG2501C||68, 214, 234|
|VNG6143H||hypothetical protein VNG6143H||5, 26, 31, 72, 86, 106, 204, 232, 243, 295, 298|
|VNG6145H||hypothetical protein VNG6145H||31, 72, 86, 106, 232, 298|
|VNG6288C||hypothetical protein VNG6288C||209|
|VNG6339H||hypothetical protein VNG6339H||26, 31, 69, 86, 106, 204, 232|
|VNG6348H||hypothetical protein VNG6348H||85, 86, 106, 160, 209|
|VNG6365H||hypothetical protein VNG6365H||86, 209|
|VNG7047||hypothetical protein VNG7047||57, 86, 209, 216, 298|
|VNG7056||hypothetical protein VNG7056||86, 105, 106, 186, 209, 232, 238, 243, 257, 298|
|VNG7099||hypothetical protein VNG7099||57, 209|
|VNG7117||hypothetical protein VNG7117||86, 106|
|VNG7127||hypothetical protein VNG7127||86, 106, 209, 257, 298|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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