Organism : Halobacterium salinarum NRC-1 | Module List :
hypothetical protein VNG0298H
Functional Annotations (1)
|Predicted membrane protein||cog/ cog|
Regulation information for VNG0298H(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 6 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for VNG0298H
|Predicted membrane protein||cog/ cog|
Module neighborhood information for VNG0298H
|Gene||Common Name||Description||Module membership|
|VNG0033H||hypothetical protein VNG0033H||83, 269|
|VNG0061C||hypothetical protein VNG0061C||251, 269|
|VNG0105H||hypothetical protein VNG0105H||247, 269|
|VNG0117H||hypothetical protein VNG0117H||72, 207, 209, 243, 298|
|VNG0138H||hypothetical protein VNG0138H||57, 209, 298|
|VNG0214C||hypothetical protein VNG0214C||190, 269|
|VNG0243Cm||truD||tRNA pseudouridine synthase D||86, 130, 209, 298|
|VNG0280H||hypothetical protein VNG0280H||269|
|VNG0298H||hypothetical protein VNG0298H||57, 269, 298|
|VNG0301C||nicotinamide-nucleotide adenylyltransferase||57, 298|
|VNG0319H||hypothetical protein VNG0319H||269|
|VNG0329G||caaX||zinc metalloproteinase-like protein||269|
|VNG0346H||hypothetical protein VNG0346H||118, 269|
|VNG0367H||hypothetical protein VNG0367H||118, 269|
|VNG0384G||trpE2||anthranilate synthase subunit alpha||27, 269, 274|
|VNG0387G||ilvE1||branched-chain amino acid aminotransferase||27, 269, 274|
|VNG0389C||hypothetical protein VNG0389C||27, 269, 274|
|VNG0396C||hypothetical protein VNG0396C||26, 57, 243|
|VNG0407H||hypothetical protein VNG0407H||139, 298|
|VNG0415G||purB||adenylosuccinate lyase||27, 269, 274|
|VNG0442G||rspA||hypothetical protein VNG0442G||27, 269, 274|
|VNG0446G||gcd||glucose dehydrogenase||27, 269, 274|
|VNG0462C||hypothetical protein VNG0462C||42, 57, 68, 151, 162, 246|
|VNG0498C||hypothetical protein VNG0498C||139, 298|
|VNG0499G||cna||proliferating-cell nucleolar antigen||57, 86, 139, 209, 298|
|VNG0595H||hypothetical protein VNG0595H||139, 209, 298|
|VNG0622H||hypothetical protein VNG0622H||139, 209, 298|
|VNG0763G||ybjG||membrane protein||57, 243|
|VNG0818C||hypothetical protein VNG0818C||86, 106, 243, 298|
|VNG0822C||hypothetical protein VNG0822C||269|
|VNG0852C||hypothetical protein VNG0852C||269|
|VNG0861H||hypothetical protein VNG0861H||269|
|VNG0875Cm||Zn-dependent protease||139, 298|
|VNG0915G||hakA||atrazine chlorohydrolase||269, 284|
|VNG0938G||gufA||GufA protein||57, 86, 139, 209, 298|
|VNG1174G||nop56/58||nucleolar protein-like protein||57, 284|
|VNG1353C||hypothetical protein VNG1353C||269|
|VNG1394H||hypothetical protein VNG1394H||86, 209, 214, 298|
|VNG1455H||hypothetical protein VNG1455H||26, 31, 57, 86|
|VNG1470G||pri||DNA primase small subunit||139, 298|
|VNG1785G||panF||hypothetical protein VNG1785G||57, 86, 232, 243, 298|
|VNG1786H||hypothetical protein VNG1786H||269|
|VNG1815G||carA||carbamoyl phosphate synthase small subunit||68, 86, 209, 257, 294, 298|
|VNG1816G||trh3||transcription regulator||68, 86, 139, 209, 238, 257, 298|
|VNG1917H||hypothetical protein VNG1917H||139, 209, 298|
|VNG2087G||hisH||imidazole glycerol phosphate synthase subunit HisH||86, 106, 209, 298|
|VNG2101H||hypothetical protein VNG2101H||269|
|VNG2156C||hypothetical protein VNG2156C||57, 106, 209, 243, 298|
|VNG2270G||mutS3||hypothetical protein VNG2270G||57, 86, 298|
|VNG2335H||hypothetical protein VNG2335H||57, 86, 106, 139, 209, 257, 298|
|VNG2376H||hypothetical protein VNG2376H||269|
|VNG2498H||hypothetical protein VNG2498H||269|
|VNG6143H||hypothetical protein VNG6143H||5, 26, 31, 72, 86, 106, 204, 232, 243, 295, 298|
|VNG6145H||hypothetical protein VNG6145H||31, 72, 86, 106, 232, 298|
|VNG6254C||hypothetical protein VNG6254C||269|
|VNG7047||hypothetical protein VNG7047||57, 86, 209, 216, 298|
|VNG7056||hypothetical protein VNG7056||86, 105, 106, 186, 209, 232, 238, 243, 257, 298|
|VNG7078||hypothetical protein VNG7078||269|
|VNG7082||hypothetical protein VNG7082||269|
|VNG7099||hypothetical protein VNG7099||57, 209|
|VNG7127||hypothetical protein VNG7127||86, 106, 209, 257, 298|
|VNG7137||hypothetical protein VNG7137||269|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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