Organism : Methanococcus maripaludis S2
| Module List :
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MMP1469 ehbA
putative monovalent cation/H+ antiporter subunit E
Functional Annotations (5)
Function | System |
---|---|
Multisubunit Na+/H+ antiporter, MnhE subunit | cog/ cog |
cation transport | go/ biological_process |
cation transmembrane transporter activity | go/ molecular_function |
integral to membrane | go/ cellular_component |
Methane metabolism | kegg/ kegg pathway |
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Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
Motif Id | e-value | Consensus | Motif Logo |
---|---|---|---|
681 | 4.20e-03 | cTAtTTATCATgATtgATAATtA |
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682 | 1.20e+03 | CTAACGGTGc |
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869 | 1.10e+03 | CGAGTAAACCGGATAGCTTAC |
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870 | 5.60e+03 | TGaagGGCaGtggcA |
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Functional Enrichment for MMP1469
Function | System |
---|---|
Multisubunit Na+/H+ antiporter, MnhE subunit | cog/ cog |
cation transport | go/ biological_process |
cation transmembrane transporter activity | go/ molecular_function |
integral to membrane | go/ cellular_component |
Methane metabolism | kegg/ kegg pathway |
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Module neighborhood information for MMP1469
Gene | Common Name | Description | Module membership |
---|---|---|---|
MMP0001 | hypothetical protein MMP0001 | 46, 106, 121, 144 | |
MMP0002 | L-seryl-tRNA selenium transferase | 12, 46, 76, 106, 121 | |
MMP0030 | MCM family DNA replication protein | 106, 117 | |
MMP0084 | hypothetical protein MMP0084 | 49, 106 | |
MMP0085 | hypothetical protein MMP0085 | 22, 106 | |
MMP0091 | hypothetical protein MMP0091 | 51, 106 | |
MMP0239 | hypothetical protein MMP0239 | 1, 49, 75, 106 | |
MMP0420 | CBS domain-containing protein | 13, 106 | |
MMP0425 | hypothetical protein MMP0425 | 57, 102, 106 | |
MMP0426 | nitroreductase family protein | 57, 102, 106, 153 | |
MMP0531 | hypothetical protein MMP0531 | 106, 140 | |
MMP0535 | hypothetical protein MMP0535 | 57, 102, 106 | |
MMP0598 | phosphoglycerate mutase-related | 106, 151 | |
MMP0605 | putative RNA-processing protein | 12, 106 | |
MMP0630 | feoB | ferrous iron transporter | 28, 76, 106, 121 |
MMP0808 | hypothetical protein MMP0808 | 12, 106 | |
MMP0809 | phosphoribosylaminoimidazole carboxylase-like protein | 12, 106 | |
MMP0958 | hypothetical protein MMP0958 | 57, 102, 106 | |
MMP0959 | trxB | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | 57, 102, 106 |
MMP0969 | hypothetical protein MMP0969 | 106, 115 | |
MMP0984 | cdh | acetyl-CoA decarbonylase/synthase complex subunit epsilon | 10, 17 |
MMP0985 | cdhA | acetyl-CoA decarbonylase/synthase complex subunit alpha | 10, 17 |
MMP1001 | hypothetical protein MMP1001 | 57, 102, 106 | |
MMP1051 | surE | stationary phase survival protein SurE | 12, 28, 106 |
MMP1069 | basic helix-loop-helix dimerization domain-containing protein | 106, 115 | |
MMP1071 | hypothetical protein MMP1071 | 1, 106 | |
MMP1072 | aminotransferase (subgroup I) aromatic aminotransferase | 1, 106 | |
MMP1073 | ehbC | putative monovalent cation/H+ antiporter subunit G | 35, 106 |
MMP1074 | ehbD | hypothetical protein MMP1074 | 17, 106 |
MMP1091 | ADP-glucose pyrophosphorylase | 99, 106 | |
MMP1152 | hypothetical protein MMP1152 | 10, 147 | |
MMP1153 | ehbN | energy conserving hydrogenase B large subunit | 10, 147 |
MMP1234 | UBA/THIF-type NAD/FAD binding protein | 33, 54, 55, 106 | |
MMP1235 | moaE | molybdopterin biosynthesis MoaE | 49, 55, 106, 117, 150 |
MMP1271 | vorA | 2-oxoisovalerate oxidoreductase subunit alpha | 10, 17 |
MMP1272 | vorB | 2-ketoisovalerate ferredoxin reductase | 10, 147 |
MMP1273 | vorC | 2-oxoisovalerate oxidoreductase subunit gamma | 10, 147 |
MMP1274 | AMP-dependent synthetase and ligase | 10, 17 | |
MMP1275 | hypothetical protein MMP1275 | 10, 147 | |
MMP1282 | hypothetical protein MMP1282 | 49, 102, 106, 150 | |
MMP1469 | ehbA | putative monovalent cation/H+ antiporter subunit E | 10, 106 |
MMP1502 | porF | hypothetical protein MMP1502 | 10, 17 |
MMP1503 | porE | pyruvate oxidoreductase-associated | 10, 17 |
MMP1504 | porB | pyruvate ferredoxin oxidoreductase subunit beta | 10, 17 |
MMP1505 | porA | pyruvate oxidoreductase (synthase) subunit alpha | 10, 17 |
MMP1506 | porD | pyruvate oxidoreductase (synthase) subunit delta | 10, 17 |
MMP1507 | porC | pyruvate ferredoxin oxidoreductase subunit gamma | 10, 17 |
MMP1573 | bioD | dethiobiotin synthase | 28, 106 |
MMP1598 | hypothetical protein MMP1598 | 76, 102, 106 | |
MMP1611 | hypothetical protein MMP1611 | 21, 106 | |
MMP1621 | ehbO | energy conserving hydrogenase B integral membrane subunit | 10, 147 |
MMP1622 | ehbM | energy conserving hydrogenase B small subunit | 10, 147 |
MMP1623 | ehbL | ferredoxin | 10, 147 |
MMP1624 | ehbK | polyferredoxin | 10, 147 |
MMP1625 | ehbJ | hypothetical protein MMP1625 | 10, 147 |
MMP1626 | putative monovalent cation/H+ antiporter subunit B | 10, 147 | |
MMP1627 | ehbG | hypothetical protein MMP1627 | 10, 147 |
MMP1628 | ehbF | hydrogenase subunit F | 10, 147 |
MMP1629 | ehbE | putative monovalent cation/H+ antiporter subunit C | 10, 147 |
MMP1682 | recJ | single stranded DNA-specific exonuclease | 21, 106 |
MMP1712 | LysR family transcriptional regulator | 19, 106 |
Gene Page Help
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If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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- 1. All genomic elements for the organism are represented as a circle and each element is separated by black tick marks. In this example chromosome and pDV represent main chromosome and plasmid for D. vulgaris Hildenborough, respectively.
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