Organism : Rhodobacter sphaeroides 2.4.1 | Module List :
Possible transporter, RhaT family, DMT superfamily (NCBI)
Functional Annotations (1)
Regulation information for RSP_2492(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for RSP_2492
Module neighborhood information for RSP_2492
|Gene||Common Name||Description||Module membership|
|RSP_0163||RSP_0163||putative iron(III) ABC transporter, fused inner membrane subunits (NCBI)||115, 234|
|RSP_0358||gor||probable glutathione reductase (NCBI)||234, 299|
|RSP_0364||RSP_0364||possible transporter, RarD family, DMT superfamily (NCBI)||38, 234|
|RSP_0418||RSP_0418||hypothetical protein (NCBI)||58, 234|
|RSP_0551||RSP_0551||putative thymidylate kinase (NCBI)||234, 340|
|RSP_0560||priA||Probable pimosomal protein N' (NCBI)||54, 340|
|RSP_0562||RSP_0562||hypothetical protein (NCBI)||54, 279|
|RSP_0681||RSP_0681||hypothetical protein (NCBI)||54, 243|
|RSP_0724||mscL||Large-conductance mechanosensitive channel (NCBI)||59, 234|
|RSP_0729||lysA||Orn/DAP/Arg decarboxylase, family 2 (NCBI)||54, 234|
|RSP_0730||RSP_0730||hypothetical protein (NCBI)||2, 54|
|RSP_0755||nusB||putative N utilization substance protein B (NCBI)||234, 240|
|RSP_0830||RSP_0830||CBS-domain-containing membrane protein (NCBI)||54, 69|
|RSP_1014||RSP_1014||sigma24 (NCBI)||54, 236|
|RSP_1015||RSP_1015||Putative membrane protein with von Willebrand (VWA) domain (NCBI)||54, 124|
|RSP_1130||RSP_1130||hypothetical membrane protein (NCBI)||54, 91|
|RSP_1206||RSP_1206||putative phosphohydrolase (mutT/nudix family protein) (NCBI)||54, 149|
|RSP_1233||maf||putative Maf/YceF/YhdE family protein (NCBI)||87, 234|
|RSP_1286||cbbR||RuBisCO operon transcriptional regulator, CbbR (NCBI)||54, 340|
|RSP_1306||RSP_1306||PAS sensor Signal Tranduction Histidine Kinase (NCBI)||4, 234|
|RSP_1389||aroC||Chorismate synthase (NCBI)||181, 234|
|RSP_1391||thiB||ABC thiamine transporter, periplasmic substrate-binding protein (NCBI)||121, 234|
|RSP_1392||thiP||ABC thiamine transporter, inner membrane subunit (NCBI)||233, 234|
|RSP_1414||RSP_1414||hypothetical protein (NCBI)||54, 94|
|RSP_1462||lpxK||Putative Tetraacyldisaccharide-1-P 4'-kinase (NCBI)||84, 234|
|RSP_1472||RSP_1472||hypothetical protein (NCBI)||113, 234|
|RSP_1635||RSP_1635||hypothetical protein (NCBI)||31, 54|
|RSP_1800||RSP_1800||hypothetical protein (NCBI)||234, 293|
|RSP_1928||dnaB||Replicative DNA helicase, DnaB (NCBI)||76, 234|
|RSP_2015||argK||ATPase (NCBI)||54, 113|
|RSP_2075||RSP_2075||Putative Transcriptional regulator (NCBI)||54, 213|
|RSP_2205||RSP_2205||hypothetical protein (NCBI)||67, 234|
|RSP_2206||RSP_2206||hypothetical protein (NCBI)||67, 234|
|RSP_2302||RSP_2302||putative low specificity L-threonine aldolase (NCBI)||54, 146|
|RSP_2303||RSP_2303||hypothetical protein (NCBI)||54, 271|
|RSP_2306||RSP_2306||putative HAD superfamily protein (NCBI)||234, 279|
|RSP_2407||RSP_2407||periplasmic sensor hybrid histidine kinase (NCBI)||234, 322|
|RSP_2409||rluD||putative Pseudouridine synthase, Rlu (NCBI)||54, 316|
|RSP_2492||RSP_2492||Possible transporter, RhaT family, DMT superfamily (NCBI)||54, 234|
|RSP_2800||acoR||Putative AcoR, Transcriptional activator of acetoin/glycerol metabolism (NCBI)||234, 337|
|RSP_2817||aroK||Putative shikimate kinase (NCBI)||26, 234|
|RSP_2818||aroB||Putative 3-dehydroquinate synthase (NCBI)||84, 234|
|RSP_2850||mfd||transcription-repair coupling factor (helicase) (NCBI)||54, 340|
|RSP_2896||RSP_2896||Multiple antibiotic transporter (NCBI)||15, 234|
|RSP_2971||RSP_2971||S-adenosylmethionine tRNA ribosyltransferase-isomerase (NCBI)||54, 218|
|RSP_2972||RSP_2972||hypothetical protein (NCBI)||54, 158|
|RSP_3091||RSP_3091||Coserved hypothetical protein (NCBI)||54, 84|
|RSP_3126||RSP_3126||Arsenite efflux pump, ACR3 family (NCBI)||54, 196|
|RSP_3127||arsC||Putative arsenate reductase (NCBI)||54, 181|
|RSP_3430||RSP_3430||transcriptional regulator, winged helix family (NCBI)||54, 121|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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