Organism : Rhodobacter sphaeroides 2.4.1 | Module List :
hypothetical membrane protein (NCBI)
Functional Annotations (1)
|Predicted membrane protein||cog/ cog|
Regulation information for RSP_1130(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for RSP_1130
|Predicted membrane protein||cog/ cog|
Module neighborhood information for RSP_1130
|Gene||Common Name||Description||Module membership|
|RSP_0010||RSP_0010||homoserine O-succinyltransferase (NCBI)||91, 133|
|RSP_0011||RSP_0011||Predicted hydrolases or acyltransferases (alpha/beta hydrolase) (NCBI)||91, 366|
|RSP_0013||RSP_0013||hypothetical protein (NCBI)||68, 91|
|RSP_0014||RSP_0014||transcriptional regulator, TetR family (NCBI)||91, 215|
|RSP_0560||priA||Probable pimosomal protein N' (NCBI)||54, 340|
|RSP_0562||RSP_0562||hypothetical protein (NCBI)||54, 279|
|RSP_0681||RSP_0681||hypothetical protein (NCBI)||54, 243|
|RSP_0729||lysA||Orn/DAP/Arg decarboxylase, family 2 (NCBI)||54, 234|
|RSP_0730||RSP_0730||hypothetical protein (NCBI)||2, 54|
|RSP_0774||RSP_0774||RNA binding protein (NCBI)||91, 184|
|RSP_0830||RSP_0830||CBS-domain-containing membrane protein (NCBI)||54, 69|
|RSP_1014||RSP_1014||sigma24 (NCBI)||54, 236|
|RSP_1015||RSP_1015||Putative membrane protein with von Willebrand (VWA) domain (NCBI)||54, 124|
|RSP_1018||RSP_1018||Glycolate oxidase iron-sulfur subunit (NCBI)||91, 148|
|RSP_1019||RSP_1019||putative glycolate oxidase subunit protein (NCBI)||91, 148|
|RSP_1034||pdhR||Pyruvate dehydrogenase complex repressor (NCBI)||91, 148|
|RSP_1130||RSP_1130||hypothetical membrane protein (NCBI)||54, 91|
|RSP_1172||dnaJ||Chaperone, DnaJ (NCBI)||91, 297|
|RSP_1206||RSP_1206||putative phosphohydrolase (mutT/nudix family protein) (NCBI)||54, 149|
|RSP_1286||cbbR||RuBisCO operon transcriptional regulator, CbbR (NCBI)||54, 340|
|RSP_1292||RSP_1292||putative Aldehyde dehydrogenase (NCBI)||91, 107|
|RSP_1414||RSP_1414||hypothetical protein (NCBI)||54, 94|
|RSP_1487||RSP_1487||hypothetical protein (NCBI)||91, 289|
|RSP_1488||RSP_1488||Possible glyoxalase (NCBI)||91, 289|
|RSP_1516||RSP_1516||putative S-adenosyl L-homocystein hydrolase (NCBI)||91, 197|
|RSP_1635||RSP_1635||hypothetical protein (NCBI)||31, 54|
|RSP_1895||RSP_1895||Small-conductance mechanosensitive ion channel (NCBI)||91, 231|
|RSP_1899||RSP_1899||Predicted ATPase (NCBI)||91, 220|
|RSP_1900||RSP_1900||hypothetical protein (NCBI)||91, 233|
|RSP_1901||RSP_1901||Hypothetical protein with TPR repeat (NCBI)||91, 245|
|RSP_2015||argK||ATPase (NCBI)||54, 113|
|RSP_2075||RSP_2075||Putative Transcriptional regulator (NCBI)||54, 213|
|RSP_2263||RSP_2263||hypothetical protein (NCBI)||91, 125|
|RSP_2302||RSP_2302||putative low specificity L-threonine aldolase (NCBI)||54, 146|
|RSP_2303||RSP_2303||hypothetical protein (NCBI)||54, 271|
|RSP_2409||rluD||putative Pseudouridine synthase, Rlu (NCBI)||54, 316|
|RSP_2456||radA||DNA Repair Protein (NCBI)||39, 91|
|RSP_2492||RSP_2492||Possible transporter, RhaT family, DMT superfamily (NCBI)||54, 234|
|RSP_2605||RSP_2605||hypothetical protein (NCBI)||91, 197|
|RSP_2606||RSP_2606||ArsR family Arsenical Resistance Operon Repressor (NCBI)||91, 197|
|RSP_2607||RSP_2607||nitrilotriacetate monooxygenase component B (NCBI)||91, 197|
|RSP_2608||corA||magnesium/cobalt transport protein, MIT family (NCBI)||91, 197|
|RSP_2810||RSP_2810||ABC transporter, ATPase subunit (NCBI)||91, 294|
|RSP_2850||mfd||transcription-repair coupling factor (helicase) (NCBI)||54, 340|
|RSP_2971||RSP_2971||S-adenosylmethionine tRNA ribosyltransferase-isomerase (NCBI)||54, 218|
|RSP_2972||RSP_2972||hypothetical protein (NCBI)||54, 158|
|RSP_3091||RSP_3091||Coserved hypothetical protein (NCBI)||54, 84|
|RSP_3107||RSP_3107||hypothetical protein (NCBI)||91, 350|
|RSP_3126||RSP_3126||Arsenite efflux pump, ACR3 family (NCBI)||54, 196|
|RSP_3127||arsC||Putative arsenate reductase (NCBI)||54, 181|
|RSP_3384||RSP_3384||mandelate racemase/muconate lactonizing enzyme family protein (NCBI)||91, 346|
|RSP_3430||RSP_3430||transcriptional regulator, winged helix family (NCBI)||54, 121|
|RSP_3435||RSP_3435||possible DNA-binding protein (NCBI)||91, 316|
|RSP_3456||RSP_3456||Putative dihydrodipicolinate synthase (NCBI)||61, 91|
|RSP_3785||RSP_3785||putative bacteriophage-related protein (NCBI)||91, 105|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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