Organism : Rhodobacter sphaeroides 2.4.1 | Module List :
Putative Mg++ transport associated protein, MgtC (NCBI)
Functional Annotations (2)
|Uncharacterized membrane protein||cog/ cog|
Regulation information for RSP_2677(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for RSP_2677
|Uncharacterized membrane protein||cog/ cog|
Module neighborhood information for RSP_2677
|Gene||Common Name||Description||Module membership|
|RSP_0209||RSP_0209||possible prophage Lp3 protein 18 (NCBI)||103, 138|
|RSP_0234||tlpL||TlpL, putative cytoplasmic chemoreceptor (NCBI)||138, 235|
|RSP_0543||fixU||hypothetical protein (NCBI)||141, 244|
|RSP_0544||nifZ||probable NifZ (NCBI)||141, 354|
|RSP_0545||RSP_0545||hypothetical protein (NCBI)||141, 300|
|RSP_0615||RSP_0615||Putative oxidoreductase (NCBI)||138, 193|
|RSP_0634||RSP_0634||TRAP-T family transporter, DctM (12 TMs) subunit (NCBI)||17, 141|
|RSP_0635||RSP_0635||TRAP-T family transporter, DctQ (4 TMs) subunit (NCBI)||17, 141|
|RSP_0636||RSP_0636||TRAP-T family transporter, DctP (periplasmic binding) subunit (NCBI)||17, 141|
|RSP_0838||RSP_0838||putative DNA polymerase III, delta subunit / DNA binding (NCBI)||141, 342|
|RSP_0888||amtB||Ammonium transporter, AmtB (NCBI)||141, 183|
|RSP_1042||RSP_1042||hypothetical protein (NCBI)||141, 357|
|RSP_1171||radC||DNA repair protein (NCBI)||138, 150|
|RSP_1305||RSP_1305||putative flagellar hook-associated protein (NCBI)||138, 246|
|RSP_1433||RSP_1433||hypothetical protein (NCBI)||141, 285|
|RSP_1441||RSP_1441||regulatory protein, GntR family (NCBI)||89, 141|
|RSP_1504||RSP_1504||hypothetical protein (NCBI)||138, 183|
|RSP_1616||RSP_1616||hypothetical protein (NCBI)||141, 342|
|RSP_1652||RSP_1652||hypothetical protein (NCBI)||73, 141|
|RSP_1774||RSP_1774||Putative glucose dehydrogenase B (NCBI)||138, 282|
|RSP_1781||RSP_1781||putative membrane-anchored oxidoreductase, similar to L-sorbosone dehydrogenase (NCBI)||138, 191|
|RSP_1957||RSP_1957||hypothetical protein (NCBI)||138, 235|
|RSP_2010||RSP_2010||hypothetical protein (NCBI)||141, 343|
|RSP_2037||RSP_2037||hypothetical protein (NCBI)||138, 147|
|RSP_2040||RSP_2040||possible Transposase fragment (NCBI)||138, 235|
|RSP_2062||RSP_2062||hypothetical protein (NCBI)||138, 191|
|RSP_2064||RSP_2064||hypothetical protein (NCBI)||138, 303|
|RSP_2065||RSP_2065||hypothetical protein (NCBI)||138, 191|
|RSP_2066||RSP_2066||hypothetical protein (NCBI)||138, 303|
|RSP_2072||RSP_2072||Putative Phage-related Holin protein (NCBI)||138, 282|
|RSP_2150||RSP_2150||predicted Glycosyl transferase, family 2 (NCBI)||138, 249|
|RSP_2151||yohD||putative DedA family, membrane protein (NCBI)||138, 249|
|RSP_2152||RSP_2152||putative ceramide glucosyltransferase (NCBI)||138, 249|
|RSP_2553||RSP_2553||hypothetical protein (NCBI)||141, 157|
|RSP_2677||RSP_2677||Putative Mg++ transport associated protein, MgtC (NCBI)||138, 141|
|RSP_2756||RSP_2756||hypothetical protein (NCBI)||125, 141|
|RSP_3025||RSP_3025||possible NAD(P)H oxidoreductase (NCBI)||141, 303|
|RSP_3036||RSP_3036||hypothetical protein (NCBI)||38, 141|
|RSP_3060||cysE||possible O-acetylserine synthase (NCBI)||141, 370|
|RSP_3061||RSP_3061||hypothetical protein (NCBI)||38, 141|
|RSP_3062||fabG||3-oxoacyl-(acyl-carrier-protein) reductase (NCBI)||141, 370|
|RSP_3137||RSP_3137||hypothetical protein (NCBI)||141, 168|
|RSP_3201||RSP_3201||putative oxidoreductase (NCBI)||138, 235|
|RSP_3335||RSP_3335||ABC spermidine/putrescine transporter, inner membrane subunit (NCBI)||44, 141|
|RSP_3336||RSP_3336||ABC spermidine/putrescine transporter, inner membrane subunit (NCBI)||44, 141|
|RSP_3413||RSP_3413||ABC Fe+3-siderophore transporter, ATPase subunit (NCBI)||138, 253|
|RSP_3415||RSP_3415||ABC Fe+3-siderophore transporter, inner membrane subunit (NCBI)||74, 138|
|RSP_3443||RSP_3443||putative acetamidase/formamidase (NCBI)||61, 141|
|RSP_3652||RSP_3652||Predicted phage phi-C31 gp36 major capsid-like protein (NCBI)||141, 233|
|RSP_3653||RSP_3653||hypothetical protein (NCBI)||141, 233|
|RSP_3663||RSP_3663||TRAP-T family transporter, small (4TMs) inner membrane subunit (NCBI)||141, 342|
|RSP_3763||RSP_3763||hypothetical protein (NCBI)||137, 138|
|RSP_3786||RSP_3786||hypothetical protein (NCBI)||141, 236|
|RSP_3791||RSP_3791||hypothetical protein (NCBI)||137, 138|
|RSP_3794||RSP_3794||hypothetical protein (NCBI)||29, 141|
|RSP_3797||RSP_3797||hypothetical protein (NCBI)||141, 157|
|RSP_3811||RSP_3811||hypothetical protein (NCBI)||138, 246|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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