Regulatory Modules
Displaying 21 - 30 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0073 | 85 | 14000 | 0.36 | DVU1715, DVU1717, DVU1719, DVU1720, DVU1723, DVU1725, DVU2171, DVU2185, DVU2597, DVU2789, DVU1114, DVU2166 | DNA binding, nucleic acid binding |
bicluster_0235 | 400 | 14000 | 0.49 | DVU0753, DVU2216, DVU3116, DVU0399, DVU0503, DVU0507, DVU0508, DVU0510, DVU0809, DVU0810, DVU1247, DVU1248, DVU1298, DVU1299, DVU1300, DVU1571, DVU1622, DVU2298, DVU2299, DVU2913, DVU2914, DVU3206, DVU3307, DVU3308, DVU3310 | IMP biosynthetic process, 'de novo' IMP biosynthetic process, IMP metabolic process, purine nucleotide biosynthetic process, purine nucleoside monophosphate biosynth... |
bicluster_0119 | 1600 | 13000 | 0.49 | DVU0093, DVU0359, DVU0380, DVU0418, DVU1467, DVU1722, DVU2420, DVU2486, DVU2554, DVU2555, DVU2641, DVU2658, DVU2659, DVU2667, DVU0146, DVU0159, DVU0160, DVU0243, DVU0319, DVU0417, DVU0831, DVU1192, DVU2258, DVU2752, DVU2876 | DNA recombination, antiporter activity, hydrolase activity, acting on acid anhyd..., hydrolase activity, acting on acid anhyd..., carbohydrate binding |
bicluster_0287 | 2900 | 13000 | 0.31 | DVU0419, DVU0572, DVU0813, DVU1457, DVU1601, DVU1875, DVU1876, DVU1984, DVU2325, DVU2497, DVU2893, DVU2975 | protein metabolic process, cellular protein metabolic process, macromolecule metabolic process, macromolecule catabolic process, copper ion binding |
bicluster_0197 | 11000 | 13000 | 0.45 | DVU1724, DVU2706, DVU3142, DVUA0012, DVUA0034, DVUA0038, DVUA0042, DVUA0054, DVU0621, DVU2692, DVU2881, DVUA0031, DVUA0032, DVUA0035, DVUA0093, DVUA0102, DVUA0128, DVUA0136 | inorganic anion transmembrane transporte..., oxidoreductase activity, acting on iron-..., oxidoreductase activity, anion transmembrane transporter activity |
bicluster_0009 | 12000 | 13000 | 0.47 | DVU0084, DVU0087, DVU0088, DVU0091, DVU0141, DVU0142, DVU0323, DVU0324, DVU0651, DVU0794, DVU1029, DVU1185, DVU1189, DVU1369, DVU1370, DVU1459, DVU1540, DVU1860, DVU1863, DVU2257, DVU2320, DVU2461, DVU2558, DVU3297, DVU2634 | coenzyme metabolic process, cofactor metabolic process, alpha-amino acid biosynthetic process, cellular amino acid biosynthetic process, organonitrogen compound biosynthetic pro... |
bicluster_0173 | 38 | 13000 | 0.29 | DVU0419, DVU0576, DVU2975, DVU0420, DVU2282, DVU2494, DVU2495, DVU2977, DVU2978 | catalytic activity, carboxy-lyase activity, carbon-carbon lyase activity, hydrolase activity |
bicluster_0204 | 4100 | 13000 | 0.41 | DVU0189, DVU0197, DVU0202, DVU0203, DVU0206, DVU0209, DVU0210, DVU0211, DVU0212, DVU2857, DVU2858, DVU2859, DVU2861, DVU2862, DVU2863, DVU2864, DVU2866, DVU2867 | |
bicluster_0071 | 600 | 13000 | 0.48 | DVU0275, DVU0453, DVU0754, DVU0938, DVU1180, DVU1449, DVU1450, DVU1471, DVU2059, DVU2684, DVU2770, DVU2840, DVU2935, DVU2937, DVU3226, DVU3227, DVU0276, DVU0565, DVU0566, DVU1244, DVU1528, DVU1529, DVU1656, DVU1867, DVU2060, DVU2427 | gene expression, RNA metabolic process, regulation of biological process, regulation of cellular process, biological regulation |
bicluster_0041 | 1700 | 11000 | 0.35 | DVU0115, DVU0366, DVU1735, DVU2578, DVU2614, DVU2701, DVU2860, DVU3139, DVU0081, DVU2865 | NADP binding, ligase activity, forming carbon-nitrogen..., ligase activity |