Regulatory Modules
Displaying 111 - 120 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0213 |
6100 |
24000 |
0.39 | DVU0183, DVU1103, DVU2731, DVU0039, DVU1713, DVU2217, DVU2559, DVU2604, DVU2689, DVU2830, DVU3338, DVU3339, DVUA0030 | N-acetyltransferase activity, zinc ion binding, N-acyltransferase activity, transaminase activity, acetyltransferase activity |
| bicluster_0217 |
18 |
5300 |
0.34 | DVU0389, DVU2070, DVU2153, DVU0658, DVU0675, DVU1234, DVU2057, DVU2084, DVU2094, DVU2155, DVU2169, DVU3354 | virion, viral capsid, virion part, carbon-carbon lyase activity |
| bicluster_0218 |
1600 |
11000 |
0.35 | DVU0825, DVU0663, DVU0665, DVU0811, DVU0812, DVU0857, DVU0994, DVU1468, DVU1976, DVU1977, DVU2078, DVU2079, DVU2643 | sulfur amino acid metabolic process, sulfur amino acid biosynthetic process, serine family amino acid metabolic proce..., sulfur compound metabolic process, sulfur compound biosynthetic process |
| bicluster_0219 |
0.12 |
0.67 |
0.49 | DVU1082, DVU1678, DVU1964, DVU2066, DVU2067, DVU2265, DVU2648, DVU2651, DVU3146, DVU0695, DVU0781, DVU0782, DVU0783, DVU1393, DVU1859, DVU1965, DVU1966, DVU2017, DVU2652, DVU2653, DVU2917, DVU2919, DVU3138 | cellular protein modification process, protein modification process, macromolecule modification, 3'-5' exonuclease activity, hydrolase activity, acting on carbon-nit... |
| bicluster_0220 |
110 |
600 |
0.46 | DVU1094, DVU1095, DVU1913, DVU3197, DVU3348, DVU3349, DVU3350, DVU1653, DVU3024, DVU3025, DVU3026, DVU3027, DVU3028, DVU3029, DVU3030, DVU3031, DVU3032, DVU3033, DVU3199, DVU3200, DVU3235, DVU3347 | sulfur compound metabolic process, sulfur compound biosynthetic process, glutamine family amino acid biosynthetic..., glutamine family amino acid metabolic pr..., coenzyme biosynthetic process |
| bicluster_0223 |
0.012 |
8400 |
0.49 | DVU0135, DVU0660, DVU0724, DVU0796, DVU1060, DVU1220, DVU1693, DVU1827, DVU1942, DVU1978, DVU2436, DVU3389, DVU0136, DVU0141, DVU0323, DVU0414, DVU0726, DVU0795, DVU1029, DVU1091, DVU1540, DVU2055, DVU2210, DVU2471, DVU2493, DVU2552, DVU2892, DVU3208 | cellular nitrogen compound metabolic pro..., cellular aromatic compound metabolic pro..., cellular nitrogen compound biosynthetic ..., IMP biosynthetic process, 'de novo' IMP biosynthetic process |
| bicluster_0227 |
4100 |
8300 |
0.46 | DVU0525, DVU3366, DVU0759, DVU0825, DVU0856, DVU0864, DVU0865, DVU1191, DVU1193, DVU1267, DVU1432, DVU1467, DVU1788, DVU1789, DVU1855, DVU2363, DVU2487, DVU2488, DVU2554, DVU3243, DVU3315, DVU3365 | peptidase activity, aminopeptidase activity, exopeptidase activity |
| bicluster_0231 |
430 |
2900 |
0.46 | DVU1128, DVU1129, DVU1131, DVU1142, DVU2698, DVU2699, DVU2711, DVU1116, DVU1117, DVU1118, DVU1120, DVU1135, DVU1136, DVU1139, DVU1141, DVU1143, DVU2688, DVU2712, DVU2714 | response to extracellular stimulus, cellular response to extracellular stimu..., cellular response to external stimulus, cellular response to stress, DNA metabolic process |
| bicluster_0232 |
0.04 |
3.5 |
0.49 | DVU0302, DVU1190, DVU1372, DVU1373, DVU1374, DVU1375, DVU1377, DVU1378, DVU2532, DVU2965, DVU0837, DVU0838, DVU0936, DVU0942, DVU0986, DVU0987, DVU1093, DVU1367, DVU1392, DVU1612, DVU1834, DVU3187 | RNA processing, ncRNA processing, ncRNA metabolic process, cell cycle, TAT protein transport complex |
| bicluster_0233 |
0.00041 |
0.00000087 |
0.49 | DVU0618, DVU1477, DVU1705, DVU1706, DVU1734, DVU2180, DVU2717, DVU2718, DVU0570, DVU1427, DVU1478, DVU1480, DVU1520, DVU1521, DVU1711, DVU1745, DVU2178, DVU2709, DVUA0018, DVUA0019, DVUA0020, DVUA0026 | DNA binding, nucleic acid binding, sequence-specific DNA binding |
