Regulatory Modules
Displaying 71 - 80 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0135 | 1.9 | 5000 | 0.47 | DVU0299, DVU0300, DVU0570, DVU0677, DVU1440, DVU1532, DVU1548, DVU1606, DVU2251, DVU2747, DVU2933, DVU3016, DVU0079, DVU0328, DVU0691, DVU1004, DVU2373, DVU2609, DVU2779, DVU3127, DVU3392 | cell envelope organization, Gram-negative-bacterium-type cell outer ..., membrane biogenesis, single-organism membrane organization, membrane organization |
bicluster_0143 | 0.0079 | 0.000047 | 0.48 | DVU0111, DVU0459, DVU1144, DVU1175, DVU1509, DVU1758, DVU1834, DVU1849, DVU2415, DVU2912, DVU3084, DVU3089, DVU3328, DVU0880, DVU1285, DVU1664, DVU1665, DVU2300, DVU2340, DVU2655, DVU3054, DVU3150, DVU3240 | phosphorelay signal transduction system, signal transduction, signaling, intracellular signal transduction, single organism signaling |
bicluster_0146 | 0.051 | 81000 | 0.50 | DVU0841, DVU0899, DVU0936, DVU0965, DVU0966, DVU1038, DVU1067, DVU1238, DVU1392, DVU1615, DVU1910, DVU1990, DVU2150, DVU2364, DVU2783, DVU2940, DVU3171, DVU3187, DVU3238, DVU3277, DVU0041, DVU0896, DVU1064, DVU1406, DVU1423, DVU1954, DVU2056, DVU2251, DVU2782, DVU2791 | intramolecular oxidoreductase activity, intramolecular oxidoreductase activity, ..., NADP binding |
bicluster_0148 | 0.029 | 2.7 | 0.45 | DVU0174, DVU0220, DVU0253, DVU0278, DVU1569, DVU1816, DVU2202, DVU2557, DVU2968, DVU3263, DVU0006, DVU0138, DVU0238, DVU0305, DVU0883, DVU1568, DVU1812, DVU1904, DVU2076, DVU2583, DVU2616, DVU2684, DVU2935, DVU3227, DVU3296 | cellular homeostasis, homeostatic process, regulation of biological quality, biological regulation, copper ion binding |
bicluster_0149 | 4000 | 79000 | 0.35 | DVU2595, DVU2664, DVU0545, DVU1433, DVU1696, DVU1884, DVU2165, DVU2327, DVU2426, DVU2480, DVU2820 | response to stimulus |
bicluster_0151 | 180 | 3200 | 0.44 | DVU0873, DVU0874, DVU0956, DVU1287, DVU1288, DVU1289, DVU1293, DVU2519, DVU2922, DVU2925, DVU2927, DVU2928, DVU2929, DVU1574, DVU2231, DVU2518, DVU2923, DVU2924, DVU2926 | transcription, DNA-templated, RNA biosynthetic process, gene expression, RNA metabolic process, organelle |
bicluster_0152 | 640 | 3800 | 0.43 | DVU1486, DVU1494, DVU1495, DVU1497, DVU1501, DVU1503, DVU1523, DVU1487, DVU1489, DVU1502, DVU1504, DVU1505, DVU1506, DVU1972 | hydrolase activity, endonuclease activity, nuclease activity, peptidase activity, hydrolase activity, acting on ester bond... |
bicluster_0154 | 620 | 18000 | 0.38 | DVU0670, DVU0967, DVU1276, DVU1626, DVU1662, DVU1671, DVU1672, DVU2356, DVU2367, DVU1027, DVU1294, DVU1919, DVU2306, DVU2842, DVU2891 | DNA (cytosine-5-)-methyltransferase acti..., inorganic phosphate transmembrane transp..., O-acyltransferase activity, DNA-methyltransferase activity, phosphate transmembrane transporter acti... |
bicluster_0158 | 2700 | 2900 | 0.38 | DVU0857, DVU0865, DVU0994, DVU1267, DVU1602, DVU2470, DVU0242, DVU0758, DVU1278, DVU1336, DVU1337, DVU1874, DVU2310 | ATP binding, adenyl ribonucleotide binding, adenyl nucleotide binding, purine ribonucleoside triphosphate bindi..., nucleoside binding |
bicluster_0159 | 70 | 44 | 0.34 | DVU1510, DVU1692, DVU2179, DVU2220, DVU2686, DVU2836, DVU2839, DVUA0017, DVU1509, DVU1519 | DNA binding, nucleic acid binding, sequence-specific DNA binding |