Module 181 Residual: 0.51

Title Bicluster Model Residual Score
bicluster_0181 v02 0.51 -25.68
Displaying 1 - 17 of 17
Rv2417c

Details for Rv2417c -

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.34 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2417c

Tuberculist Genomic Region

Rv2419c

Details for Rv2419c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.59 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2419c

Tuberculist Genomic Region

Rv2420c Iojap protein

Details for Rv2420c - Iojap protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.40 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2420c

Tuberculist Genomic Region

Rv3554 Possible electron transfer protein FdxB (EC 1.-.-.-)

Details for Rv3554 - Possible electron transfer protein FdxB (EC 1.-.-.-)

GO Terms: NA

PATRIC Pathways: Carotenoid biosynthesis, Trinitrotoluene degradation, Puromycin biosynthesis, alpha-Linolenic acid metabolism, Amino sugar and nucleotide sugar metabolism, Insect hormone biosynthesis, Biosynthesis of type II polyketide products, Isoquinoline alkaloid biosynthesis, Porphyrin and chlorophyll metabolism, Secondary bile acid biosynthesis

Essentiality: Griffin Essential: 0.98 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3554

Tuberculist Genomic Region

Rv3556c Probable acetyl-CoA acetyltransferase FadA6 (EC 2.3.1.9)

Details for Rv3556c - Probable acetyl-CoA acetyltransferase FadA6 (EC 2.3.1.9)

GO Terms: GO:0052572

PATRIC Pathways: Propanoate metabolism, Pyruvate metabolism, Benzoate degradation via hydroxylation, Valine, leucine and isoleucine degradation, Glyoxylate and dicarboxylate metabolism, Terpenoid backbone biosynthesis, Butanoate metabolism, Reductive carboxylate cycle (CO2 fixation), Fatty acid metabolism, Lysine degradation, Tryptophan metabolism, Synthesis and degradation of ketone bodies

Essentiality: Griffin Essential: 0.12 | In vitro Essential: NA | In vivo Essential: 0.26

Go to Gene Page: Rv3556c

Tuberculist Genomic Region

Rv3557c Transcriptional factor in putative operon for degradation of branched-chain alkanes, nitroalkanes and may be also cyclic ketones, alkenoic acids

Details for Rv3557c - Transcriptional factor in putative operon for degradation of branched-chain alkanes, nitroalkanes and may be also cyclic ketones, alkenoic acids

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.87 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3557c

Tuberculist Genomic Region

Rv3560c FadE30

Details for Rv3560c - FadE30

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: 0.12

Go to Gene Page: Rv3560c

Tuberculist Genomic Region

Rv3562 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Details for Rv3562 - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.32 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3562

Tuberculist Genomic Region

Rv3563 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Details for Rv3563 - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

GO Terms: GO:0004085

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.94 | In vitro Essential: NA | In vivo Essential: 0.18

Go to Gene Page: Rv3563

Tuberculist Genomic Region

Rv3548c

Details for Rv3548c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.90 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3548c

Tuberculist Genomic Region

Rv3549c Probable short-chain type dehydrogenase/reductase (EC 1.-.-.-)

Details for Rv3549c - Probable short-chain type dehydrogenase/reductase (EC 1.-.-.-)

GO Terms: NA

PATRIC Pathways: Biosynthesis of type II polyketide products, Isoquinoline alkaloid biosynthesis, Porphyrin and chlorophyll metabolism, Amino sugar and nucleotide sugar metabolism, Trinitrotoluene degradation, alpha-Linolenic acid metabolism, Puromycin biosynthesis, Secondary bile acid biosynthesis, Insect hormone biosynthesis, Carotenoid biosynthesis

Essentiality: Griffin Essential: 0.75 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3549c

Tuberculist Genomic Region

Rv3550 Probable enoyl-CoA hydratase EchA20 (EC 4.2.1.17)
Rv3551 Putative CoA-transferase subunit alpha Rv3551/MT3655 (EC 2.8.3.-)

Details for Rv3551 - Putative CoA-transferase subunit alpha Rv3551/MT3655 (EC 2.8.3.-)

GO Terms: GO:0044117

PATRIC Pathways: Naphthalene and anthracene degradation, Geraniol degradation, Reductive carboxylate cycle (CO2 fixation)

Essentiality: Griffin Essential: 0.40 | In vitro Essential: NA | In vivo Essential: 0.19

Go to Gene Page: Rv3551

Tuberculist Genomic Region

Rv3553 2-nitropropane dioxygenase (EC 1.13.11.32)

Details for Rv3553 - 2-nitropropane dioxygenase (EC 1.13.11.32)

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.68 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3553

Tuberculist Genomic Region

Rv3559c 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)

Details for Rv3559c - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)

GO Terms: GO:0040007

PATRIC Pathways: Fatty acid biosynthesis

Essentiality: Griffin Essential: 0.87 | In vitro Essential: 0.14 | In vivo Essential: NA

Go to Gene Page: Rv3559c

Tuberculist Genomic Region

Rv3561 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

Details for Rv3561 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

GO Terms: NA

PATRIC Pathways: Fatty acid metabolism

Essentiality: Griffin Essential: 0.85 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3561

Tuberculist Genomic Region

Rv3564 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Details for Rv3564 - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

GO Terms: GO:0004085, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.75 | In vitro Essential: 0.17 | In vivo Essential: NA

Go to Gene Page: Rv3564

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.000000000000033 e-value: 88
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
GO:0016627 | GO:0050660 oxidoreductase activity, acting on the C... | flavin adenine dinucleotide binding
Displaying 1 - 7 of 7
GO:0005886 |

plasma membrane

GO:0052572 |

response to host immune response

GO:0004085 |

butyryl-CoA dehydrogenase activity

GO:0004300 |

enoyl-CoA hydratase activity

GO:0044117 |

growth of symbiont in host

GO:0040007 |

growth