Module 374 Residual: 0.50

Title Bicluster Model Residual Score
bicluster_0374 v02 0.50 -17.77
Displaying 1 - 12 of 12
Rv1405c Methyltransferase

Details for Rv1405c - Methyltransferase

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.95 | In vitro Essential: NA | In vivo Essential: 0.29

Go to Gene Page: Rv1405c

Tuberculist Genomic Region

Rv1908c Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)

Details for Rv1908c - Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)

GO Terms: GO:0004096, GO:0004601, GO:0005576, GO:0005829, GO:0005886, GO:0006979, GO:0016677, GO:0020037, GO:0042744, GO:0042803, GO:0070402, GO:0070404

PATRIC Pathways: Tryptophan metabolism, Phenylpropanoid biosynthesis, Methane metabolism, Methane metabolism, Phenylalanine metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1908c

Tuberculist Genomic Region

Rv1813c Possible membrane protein

Details for Rv1813c - Possible membrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.92 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1813c

Tuberculist Genomic Region

Rv1905c D-amino-acid oxidase (EC 1.4.3.3)

Details for Rv1905c - D-amino-acid oxidase (EC 1.4.3.3)

GO Terms: NA

PATRIC Pathways: D-Arginine and D-ornithine metabolism, Glycine, serine and threonine metabolism, Arginine and proline metabolism, Penicillin and cephalosporin biosynthesis

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1905c

Tuberculist Genomic Region

Rv1906c

Details for Rv1906c -

GO Terms: GO:0005576

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.47 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1906c

Tuberculist Genomic Region

Rv1907c

Details for Rv1907c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.92 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1907c

Tuberculist Genomic Region

Rv1909c Transcriptional regulator, FUR family

Details for Rv1909c - Transcriptional regulator, FUR family

GO Terms: GO:0003700, GO:0006979, GO:0010039, GO:0016564

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.05 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1909c

Tuberculist Genomic Region

Rv2254c Possible membrane protein

Details for Rv2254c - Possible membrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.53 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2254c

Tuberculist Genomic Region

Rv2255c

Details for Rv2255c -

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: 0.63 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2255c

Tuberculist Genomic Region

Rv3229c POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE)

Details for Rv3229c - POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE)

GO Terms: GO:0005515, GO:0005886, GO:0016213

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: 0.11

Go to Gene Page: Rv3229c

Tuberculist Genomic Region

Rv3230c Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Details for Rv3230c - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

GO Terms: GO:0016491, GO:0006118, GO:0005506, GO:0009055, GO:0005515, GO:0009055

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3230c

Tuberculist Genomic Region

Rv3841 Ferritin

Details for Rv3841 - Ferritin

GO Terms: GO:0001666, GO:0005576, GO:0005829, GO:0005886, GO:0051409

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.27 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3841

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.013 e-value: 3200
Displaying 1 - 1 of 1
HTH-type transcriptional regulator
regulates 17 modules
Weight: 
0.11
up-regulates
Iron-dependent repressor IdeR/DtxR
regulates 12 modules
Weight: 
0.11
up-regulates
Transcriptional regulator, TetR family
regulates 7 modules
Weight: 
0.09
up-regulates
Transcriptional regulator, MerR family
regulates 12 modules
Weight: 
-0.09
down-regulates
Transcriptional regulator, TetR family
regulates 23 modules
Weight: 
-0.09
down-regulates
Transcriptional regulator, ArsR family
regulates 25 modules
Weight: 
0.08
up-regulates
Heat-inducible transcription repressor HrcA
regulates 7 modules
Weight: 
0.08
up-regulates
Transcriptional regulator, TetR family
regulates 19 modules
Weight: 
-0.07
down-regulates
Adenylyl cyclase class-3/4/guanylyl cyclase / Disease resistance domain-containing protein / Tetratricopeptide repeat-containing protein / Transcriptional regulator, LuxR family
regulates 7 modules
Weight: 
0.07
up-regulates
Predicted regulator PutR for proline utilization, GntR family
regulates 11 modules
Weight: 
0.07
up-regulates
POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN
regulates 2 modules
Weight: 
0.06
up-regulates
Transcriptional regulator, TetR family
regulates 7 modules
Weight: 
0.06
up-regulates
regulates 9 modules
Weight: 
0.06
up-regulates
Antitoxin ParD1
regulates 9 modules
Weight: 
0.05
up-regulates
Transcriptional regulator, TetR family
regulates 2 modules
Weight: 
-0.04
down-regulates
Two component transcriptional regulatory protein DevR
regulates 19 modules
Weight: 
0.04
up-regulates
Transcriptional regulator, MarR family
regulates 12 modules
Weight: 
0.04
up-regulates
Transcriptional regulator, XRE family
regulates 6 modules
Weight: 
0.03
up-regulates
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 24 of 24
GO:0004096 |

catalase activity

GO:0004601 |

peroxidase activity

GO:0005576 |

extracellular region

GO:0005829 |

cytosol

GO:0005886 |

plasma membrane

GO:0006979 |

response to oxidative stress

GO:0016677 |

oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor

GO:0020037 |

heme binding

GO:0042744 |

hydrogen peroxide catabolic process

GO:0042803 |

protein homodimerization activity

GO:0070402 |

NADPH binding

GO:0070404 |

NADH binding

GO:0003700 |

sequence-specific DNA binding transcription factor activity

GO:0010039 |

response to iron ion

GO:0016564 |

transcription repressor activity

GO:0005515 |

protein binding

GO:0016213 |

linoleoyl-CoA desaturase activity

GO:0016491 |

oxidoreductase activity

GO:0006118 |

electron transport

GO:0005506 |

iron ion binding

GO:0009055 |

electron carrier activity

GO:0001666 |

response to hypoxia

GO:0051409 |

response to nitrosative stress