Rv0324 Transcriptional regulator, ArsR family

Rv0324 (Transcriptional regulator, ArsR family) is predicted to be co-regulated in modules bicluster_0498 with residual 0.51 and bicluster_0546 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 6.30 for bicluster_0498 and 0.00 and 0.21 for bicluster_0546 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 121 - 130 of 161
Gene Target Differential Expression Distance Expression pvalue Type
Transcriptional regulator, TetR family
Repressed 39 -1.9 0 Primary.TSS
Cytochrome P450 136
Repressed -39 -2.45 0 Primary.TSS
Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase
No -72 0.24 0.604197 CDS
Repressed -63 -1.73 6.46e-18 Primary.TSS
ATPase
No -50 -0.57 0.000208511 CDS
Histone acetyltransferase HPA2 and related acetyltransferases
No -39 -0.36 0.0112751 CDS
WhiB-like transcription regulator
Repressed 17 -0.86 0.000255765 Primary.TSS
Biotin carboxyl carrier protein
Repressed -116 -0.93 0.0000000007 Primary.TSS
PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN
No -79 -0.48 0.000856115 Primary.TSS
Repressed 12 -1.06 0.000258319 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 9.75 U
D3I 3 3 3.83 9.21 I
D3U 3 3 3.83 9.54 U
D5I 9 5 6.00 9.00 I
D5U 17 5 6.00 11.09 U
D7I 18 7 8.14 6.42 I
D7U 19 7 8.14 8.94 U
D14I 4 14 15.63 3.03 I
D14U 4 14 15.63 6.75 U
D17I 3 17 19.15 I
D17U 3 17 19.15 5.68 U
D21I 4 21 23.23 1.11 I
D21U 4 21 23.23 5.41 U
D24I 3 24 26.60 I
D24U 3 24 26.60 5.48 U
D28I 4 28 30.61 1.11 I
D28U 4 28 30.61 4.81 U