Rv0324 Transcriptional regulator, ArsR family

Rv0324 (Transcriptional regulator, ArsR family) is predicted to be co-regulated in modules bicluster_0498 with residual 0.51 and bicluster_0546 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 6.30 for bicluster_0498 and 0.00 and 0.21 for bicluster_0546 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 81 - 90 of 161
Gene Target Differential Expression Distance Expression pvalue Type
Transcriptional repressor Mce3R, TetR family
No 25 -0.56 0.012656 Primary.TSS
Zn-dependent protease with chaperone function
No -123 -0.22 0.213281 Primary.TSS
No results were found NA 25 Primary.TSS
HTH-type transcriptional regulator
Repressed 67 -1.12 0.000000000319 CDS
Transcriptional regulator, ArsR family
Repressed 12 -1.6 0.0000000000000173 Primary.TSS
Induced -145 0.81 4.21e-18 CDS
Protein cysQ homolog
Repressed 55 -1.3 0 Primary.TSS
DNA-binding protein, CopG family
Repressed -39 -0.81 0.000635783 Primary.TSS
FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria
Repressed 56 -0.81 4.09e-19 Primary.TSS
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
Repressed 51 -1.12 8.15e-18 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 9.75 U
D3I 3 3 3.83 9.21 I
D3U 3 3 3.83 9.54 U
D5I 9 5 6.00 9.00 I
D5U 17 5 6.00 11.09 U
D7I 18 7 8.14 6.42 I
D7U 19 7 8.14 8.94 U
D14I 4 14 15.63 3.03 I
D14U 4 14 15.63 6.75 U
D17I 3 17 19.15 I
D17U 3 17 19.15 5.68 U
D21I 4 21 23.23 1.11 I
D21U 4 21 23.23 5.41 U
D24I 3 24 26.60 I
D24U 3 24 26.60 5.48 U
D28I 4 28 30.61 1.11 I
D28U 4 28 30.61 4.81 U