Organism : Bacillus subtilis | Module List :
Regulation information for BSU36500(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU36500
|Gene||Common Name||Description||Module membership|
|BSU02690||ansZ||L-asparaginase (putative lipoprotein) (RefSeq)||130, 200|
|BSU02710||yczC||putative integral inner membrane protein (RefSeq)||96, 307|
|BSU02730||natK||two-component sensor histidine kinase [NatR] (RefSeq)||130, 246|
|BSU02740||natR||two-component response regulator [NatK] (RefSeq)||130, 246|
|BSU02750||natA||Na+ ABC efflux transporter (ATP-binding protein) (RefSeq)||130, 246|
|BSU02760||natB||Na+ ABC efflux transporter (permease) (RefSeq)||130, 246|
|BSU03310||nasC||assimilatory nitrate reductase (catalytic subunit) (RefSeq)||130, 405|
|BSU03330||nasA||nitrate transporter (RefSeq)||130, 405|
|BSU03340||yciA||putative GTP cyclohydrolase (RefSeq)||307, 406|
|BSU04110||lipC||lysophopholipase (RefSeq)||11, 307|
|BSU06550||yecA||putative amino acid/polyamine permease (RefSeq)||130, 301|
|BSU06870||yesE||hypothetical protein (RefSeq)||307, 361|
|BSU08230||catD||catechol-2,3-dioxygenase membrane subunit (RefSeq)||178, 307|
|BSU08240||catE||catechol-2,3-dioxygenase subunit (RefSeq)||238, 307|
|BSU08290||yfiJ||two-component sensor histidine kinase [YfiK] (RefSeq)||132, 307|
|BSU08300||yfiK||two-component response regulator [YfiJ] (RefSeq)||48, 307|
|BSU10170||fabHB||3-oxoacyl-(acyl carrier protein) synthase III (RefSeq)||307, 411|
|BSU10590||yhjP||hypothetical protein (RefSeq)||130, 371|
|BSU11040||yitM||hypothetical protein (RefSeq)||217, 307|
|BSU11320||yjzB||hypothetical protein (RefSeq)||307, 411|
|BSU12880||ykcB||putative integral membrane protein; putative glycosyl transferase (RefSeq)||130, 238|
|BSU12890||ykcC||putative glycosyltransferase (RefSeq)||130, 291|
|BSU21310||yozP||hypothetical protein; phage SPbeta (RefSeq)||174, 307|
|BSU21530||yolB||conserved hypothetical protein; phage SPbeta (RefSeq)||298, 307|
|BSU21540||yolA||exported protein of unknown function; phage SPbeta (RefSeq)||298, 307|
|BSU25950||yqcC||hypothetical protein (RefSeq)||130, 305|
|BSU25970||yqcA||hypothetical protein (RefSeq)||130, 305|
|BSU25980||yqbT||putative phage capsid assembly protein; skin element (RefSeq)||130, 305|
|BSU26000||yqbR||conserved hypothetical protein; skin element (RefSeq)||130, 305|
|BSU26010||yqbQ||conserved hypothetical protein; skin element (RefSeq)||130, 305|
|BSU26020||yqbP||conserved hypothetical protein; skin element (RefSeq)||130, 305|
|BSU26030||yqbO||putative lytic transglycosylase (RefSeq)||130, 305|
|BSU26060||yqbM||hypothetical protein (RefSeq)||129, 130|
|BSU26090||yqbJ||conserved hypothetical protein; skin element (RefSeq)||88, 130|
|BSU26100||yqbI||conserved hypothetical protein; skin element (RefSeq)||130, 175|
|BSU26170||yqbB||putative phage head morphogenesis protein; skin element (RefSeq)||130, 387|
|BSU26280||yqaK||putative DNA recombination protein; skin element (RefSeq)||130, 371|
|BSU26290||yqaJ||putative nuclease; skin element (RefSeq)||130, 371|
|BSU26740||cypA||cytochrome P450 (RefSeq)||280, 307|
|BSU32070||yuiC||hypothetical protein (RefSeq)||291, 307|
|BSU32650||yurS||hypothetical protein (RefSeq)||280, 307|
|BSU34000||cyeB||cysteine and O-acetylserine efflux permease (RefSeq)||96, 307|
|BSU34460||levB||endolevanase (RefSeq)||130, 231|
|BSU35280||yvjA||putative integral inner membrane protein (RefSeq)||307, 411|
|BSU35770||tagC||putative polyglycerol phosphate assembly and export protein (teichoic acid biosynthesis) (RefSeq)||239, 307|
|BSU36480||ywoD||putative efflux transporter (RefSeq)||50, 307|
|BSU36490||ywoC||putative hydrolase (RefSeq)||50, 307|
|BSU36500||ywoB||putative integral inner membrane protein (RefSeq)||130, 307|
|BSU38250||ywbO||putative sulfur oxido-reductase (RefSeq)||96, 307|
|BSU38390||ywbA||putative phosphotransferase system enzyme IIC permease component (RefSeq)||44, 130|
|BSU40570||yybO||putative permease (RefSeq)||130, 231|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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