10803 (Tp_HSF_2.4c) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10803 chr_18 (Tp_HSF_2.4c) regulator [Rayko] 160714 162362 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7442181 Thaps10803.3, Thaps10803.2, Thaps10803.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0474

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0095
 0.37

Most Highly Correlated Transcripts

25332

(Tp_HSF_2.4g) HSF_DNA-bind superfamily
0.81

25048

hypothetical protein
0.7874

19626

ZnMc superfamily
0.7831

3197

(Tp_HSF_2.3a) HSF_DNA-bind
0.7822

2070

hypothetical protein
0.7677

11315

CAP10 superfamily
0.7561

7816

hypothetical protein
0.7518

269257

Peptidases_S8_Subtilisin_subset
0.7508

11442

Reprolysin_3
0.7501

261472

WD40 superfamily
0.7479

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 GO:0003677 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

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