21538 PLN02666
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21538 chr_2 PLN02666 2349297 2353873 + PLN02666

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0473

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0095
 0.37

Most Highly Correlated Transcripts

24331

(Tp_TAZ5_PHD3_ZZ3) KAT11 superfamily
0.9116

263599

COG3899
0.9103

3934

COG2319
0.9061

263610

COG3899
0.9048

24231

C2 superfamily
0.8935

24852

hypothetical protein
0.8927

22922

hypothetical protein
0.8897

24063

COG3899
0.8888

25600

hypothetical protein
0.8875

22947

zf-UBR
0.8872

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Hydantoinase_B superfamily Hydantoinase B/oxoprolinase; This family includes N-methylhydaintoinase B which converts hydantoin... - 628.89 0 823 - 1341 superfamily 268169
Hydantoinase_A superfamily Hydantoinase/oxoprolinase; This family includes the enzymes hydantoinase and oxoprolinase EC:3.5.2.... - 279.563 5.07E-85 305 - 604 superfamily 251002
Hydantoinase_A superfamily Hydantoinase/oxoprolinase; This family includes the enzymes hydantoinase and oxoprolinase EC:3.5.2.... - 279.563 5.07E-85 305 - 604 superfamily 251002
Hydant_A_N superfamily Hydantoinase/oxoprolinase N-terminal region; This family is found at the N-terminus of the... - 165.512 4.05E-46 77 - 282 superfamily 253171
Hydant_A_N superfamily Hydantoinase/oxoprolinase N-terminal region; This family is found at the N-terminus of the... - 165.512 4.05E-46 77 - 282 superfamily 253171
PLN02666 5-oxoprolinase - 2281.94 0 67 - 1341 multi-dom 215358

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
30550 PHATRDRAFT_42276 PHATRDRAFT_42276 206736 204535 430467 Cre07.g325748.t1.1 AT5G37830.1 263761

KEGG

KEGG description KEGG Pathway
Glutathione metabolism map00480

GO Terms

GO:0016787 GO:0003824 GO:0017168 -

GO:0016787

hydrolase activity

Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
MF

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0017168

5-oxoprolinase (ATP-hydrolyzing) activity

Details: 
Catalysis of the reaction: 5-oxo-L-proline + ATP + 2 H(2)O = L-glutamate + ADP + 2 H(+) + phosphate.
GO Category: 
MF

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