23679 Diphthamide_syn superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
23679	chr_8	Diphthamide_syn superfamily	162139	164509	-	Diphthamide_syn superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452418	Thaps23679.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0227

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0234	0.27	5.4 1.5

Most Highly Correlated Transcripts

25473 SpoU_methylase 0.9164	3858 PTZ00141 0.908	10278 YihA_EngB 0.9075	34176 AdoMet_MTases superfamily 0.9071	4372 hypothetical protein 0.9061	22448 hypothetical protein 0.9059
23336 SRP40_C superfamily 0.9053	24429 PRMT5 superfamily 0.9028	21110 Sun 0.9026	22499 TrmA 0.9023

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Diphthamide_syn superfamily		Putative diphthamide synthesis protein; Human DPH1 is a candidate tumor suppressor gene. DPH2 from...	-	152.365	6.28E-41	110 - 603	superfamily	267727

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	250679	198282	102035	Cre08.g376150.t1.1	Not available	475147

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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