32840 Motor_domain superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32840 chr_3 Motor_domain superfamily 1957108 1960176 + Motor_domain superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445364 Thaps32840.3, Thaps32840.2, Thaps32840.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0373

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0015
 0.38

Most Highly Correlated Transcripts

262854

CBS_pair superfamily
0.9394

262607

WD40 superfamily
0.9245

15537

KISc
0.9238

35501

HELICc
0.919

263191

PLN03076
0.9155

37960

(MYO5) MYSc
0.9153

263947

SNF2_N
0.9128

14616

Motor_domain superfamily
0.9094

12602

MYSc
0.9063

12500

SNF2_N
0.9051

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Motor_domain superfamily Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the... - 425.558 2.31E-140 7 - 356 superfamily 260327
KIP1 Kinesin-like protein [Cytoskeleton] - 263.908 5.95E-77 46 - 392 multi-dom 227392

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_2444 PHATRDRAFT_2444 226839 184230 62825 Not available AT5G60930.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003777 GO:0005524 GO:0005875 GO:0007018 -

GO:0003777

microtubule motor activity

Details: 
Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0005875

microtubule associated complex

Details: 
Any multimeric complex connected to a microtubule.
GO Category: 
CC

GO:0007018

microtubule-based movement

Details: 
A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO Category: 
BP

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